Version 5.4
Mus musculus Gene: Pcdh10
Summary
InnateDB Gene IDBG-142300.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Pcdh10
Gene Name protocadherin 10
Synonyms 6430521D13Rik; 6430703F07Rik; mKIAA1400; OL-pc
Species Mus musculus
Ensembl Gene ENSMUSG00000049100
Encoded Proteins
IDBP-624902
protocadherin 10
IDBP-624903
protocadherin 10
IDBP-624905
protocadherin 10
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000138650:
This gene belongs to the protocadherin gene family, a subfamily of the cadherin superfamily. The mRNA encodes a cadherin-related neuronal receptor thought to play a role in the establishment and function of specific cell-cell connections in the brain. This family member contains 6 extracellular cadherin domains, a transmembrane domain and a cytoplasmic tail differing from those of the classical cadherins. Alternatively spliced transcripts encode isoforms with unique cytoplasmic domains. [provided by RefSeq, Jul 2008]
Gene Information
Type Protein coding
Genomic Location Chromosome 3:45378398-45434566
Strand Forward strand
Band B
Transcripts
ENSMUST00000166126 ENSMUSP00000131073
ENSMUST00000170695 ENSMUSP00000132769
ENSMUST00000171554 ENSMUSP00000131600
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 0 experimentally validated interaction(s) in this database.
They are also associated with 3 interaction(s) predicted by orthology.
Predicted by orthology
Total 3 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0005509 calcium ion binding
Biological Process
GO:0007155 cell adhesion
GO:0007156 homophilic cell adhesion
Cellular Component
GO:0005887 integral component of plasma membrane
GO:0016020 membrane
Orthologs
Species
Homo sapiens
Bos taurus
Gene ID
Gene Order
ENSG00000138650
View Gene Order
ENSBTAG00000019977
Not yet available
Cross-References
SwissProt
TrEMBL E9PX28
UniProt Splice Variant
Entrez Gene 18526
UniGene Mm.242644 Mm.397953
RefSeq NM_001098172 NM_001098170 NM_001098171
OMIM
CCDS CCDS50901 CCDS50902 CCDS50903
HPRD
IMGT
MGI ID MGI:1338042
MGI Symbol Pcdh10
EMBL AC108393
GenPept
RNA Seq Atlas 18526

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca