Version 5.4
Mus musculus Gene: Zfp398
Summary
InnateDB Gene IDBG-143923.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Zfp398
Gene Name zinc finger protein 398
Synonyms
Species Mus musculus
Ensembl Gene ENSMUSG00000062519
Encoded Proteins
IDBP-143925
zinc finger protein 398
IDBP-251432
zinc finger protein 398
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000197024:
This gene encodes a member of the Kruppel family of C2H2-type zinc-finger transcription factor proteins. The encoded protein acts as a transcriptional activator. Two transcript variants encoding distinct isoforms have been identified for this gene. Other transcript variants have been described, but their full length sequence has not been determined. [provided by RefSeq, Jul 2008]
Gene Information
Type Protein coding
Genomic Location Chromosome 6:47835661-47868257
Strand Forward strand
Band B2.3
Transcripts
ENSMUST00000079881 ENSMUSP00000078806
ENSMUST00000114598 ENSMUSP00000110245
ENSMUST00000146202
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 1 experimentally validated interaction(s) in this database.
They are also associated with 1 interaction(s) predicted by orthology.
Experimentally validated
Total 1 [view]
Protein-Protein 1 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 1 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0003674 molecular_function
GO:0003676 nucleic acid binding
GO:0046872 metal ion binding
Biological Process
GO:0006355 regulation of transcription, DNA-templated
GO:0008150 biological_process
Cellular Component
GO:0005575 cellular_component
GO:0005622 intracellular
Orthologs
Species
Homo sapiens
Bos taurus
Gene ID
Gene Order
ENSG00000197024
View Gene Order
ENSBTAG00000020445
Not yet available
Pathway Predictions based on Human Orthology Data
NETPATH
REACTOME
REACT_12627
Generic Transcription Pathway pathway
REACT_71
Gene Expression pathway
KEGG
INOH
PID NCI
Cross-References
SwissProt
TrEMBL E9Q569 Q8BV16
UniProt Splice Variant
Entrez Gene 272347
UniGene Mm.169059 Mm.409241
RefSeq NM_027477 NM_173034 XM_006506207 XM_006506208
OMIM
CCDS CCDS20099 CCDS39476
HPRD
IMGT
MGI ID MGI:1917856
MGI Symbol Zfp398
EMBL AC166252 AK081169
GenPept BAC38154
RNA Seq Atlas 272347

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca