Version 5.4
Mus musculus Gene: Ntm
Summary
InnateDB Gene IDBG-146210.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Ntm
Gene Name neurotrimin
Synonyms
Species Mus musculus
Ensembl Gene ENSMUSG00000059974
Encoded Proteins
IDBP-146212
neurotrimin
IDBP-250081
neurotrimin
IDBP-250083
neurotrimin
IDBP-534180
neurotrimin
IDBP-539151
neurotrimin
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000182667:
This gene encodes a member of the IgLON (LAMP, OBCAM, Ntm) family of immunoglobulin (Ig) domain-containing glycosylphosphatidylinositol (GPI)-anchored cell adhesion molecules. The encoded protein may promote neurite outgrowth and adhesion via a homophilic mechanism. This gene is closely linked to a related family member, opioid binding protein/cell adhesion molecule-like (OPCML), on chromosome 11. Multiple transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Jan 2009]
Gene Information
Type Protein coding
Genomic Location Chromosome 9:28994750-29963141
Strand Reverse strand
Band A4
Transcripts
ENSMUST00000075069 ENSMUSP00000074578
ENSMUST00000115237 ENSMUSP00000110892
ENSMUST00000115236 ENSMUSP00000110891
ENSMUST00000155308 ENSMUSP00000119030
ENSMUST00000140118 ENSMUSP00000114810
ENSMUST00000126044
ENSMUST00000148606
ENSMUST00000124119
ENSMUST00000152513
ENSMUST00000146651
ENSMUST00000151977
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 4 experimentally validated interaction(s) in this database.
They are also associated with 3 interaction(s) predicted by orthology.
Experimentally validated
Total 4 [view]
Protein-Protein 4 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 3 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0005515 protein binding
Biological Process
GO:0007155 cell adhesion
Cellular Component
GO:0005886 plasma membrane
GO:0031225 anchored component of membrane
Orthologs
Species
Homo sapiens
Bos taurus
Gene ID
Gene Order
ENSG00000182667
View Gene Order
ENSBTAG00000010032
Not yet available
Cross-References
SwissProt
TrEMBL
UniProt Splice Variant
Entrez Gene
UniGene Mm.283138 Mm.392092 Mm.392421 Mm.401053 Mm.472149
RefSeq NM_172290
OMIM
CCDS CCDS22943
HPRD
IMGT
MGI ID
MGI Symbol
EMBL
GenPept
RNA Seq Atlas

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca