Version 5.4
Mus musculus Gene: Lcn9
Summary
InnateDB Gene IDBG-147210.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Lcn9
Gene Name lipocalin 9
Synonyms 9230102I19Rik
Species Mus musculus
Ensembl Gene ENSMUSG00000023210
Encoded Proteins
IDBP-147212
lipocalin 9
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000148386:
Members of the lipocalin family, such as LCN9, have a common structure consisting of an 8-stranded antiparallel beta-barrel that forms a cup-shaped ligand-binding pocket or calyx. Lipocalins generally bind small hydrophobic ligands and transport them to specific cells (Suzuki et al., 2004 [PubMed 15363845]).[supplied by OMIM, Aug 2009]
Gene Information
Type Protein coding
Genomic Location Chromosome 2:25823153-25825537
Strand Forward strand
Band A3
Transcripts
ENSMUST00000023978 ENSMUSP00000023978
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 0 experimentally validated interaction(s) in this database.
Gene Ontology

Molecular Function
Accession GO Term
GO:0005215 transporter activity
GO:0005550 pheromone binding
Biological Process
GO:0006810 transport
GO:0008150 biological_process
Cellular Component
GO:0005575 cellular_component
GO:0005576 extracellular region
Orthologs
Species
Homo sapiens
Gene ID
Gene Order
ENSG00000148386
View Gene Order
Pathway Predictions based on Human Orthology Data
NETPATH
REACTOME
REACT_23892
Transport of fatty acids pathway
REACT_22285
Transport of vitamins, nucleosides, and related molecules pathway
REACT_15518
Transmembrane transport of small molecules pathway
REACT_267716
Orphan transporters pathway
REACT_19118
SLC-mediated transmembrane transport pathway
KEGG
INOH
PID NCI
Cross-References
SwissProt Q9D267
TrEMBL
UniProt Splice Variant
Entrez Gene 77704
UniGene Mm.159974
RefSeq NM_029959
OMIM
CCDS CCDS15792
HPRD
IMGT
MGI ID MGI:1924954
MGI Symbol Lcn9
EMBL AF435738 AK020305
GenPept AAO50215 BAB32064
RNA Seq Atlas 77704

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca