Version 5.4
Mus musculus Gene: Ly6a
Summary
InnateDB Gene IDBG-150633.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Ly6a
Gene Name lymphocyte antigen 6 complex, locus A
Synonyms Ly-6A.2; Ly-6A/E; Ly-6E.1; Sca-1; Sca1; TAP
Species Mus musculus
Ensembl Gene ENSMUSG00000075602
Encoded Proteins
IDBP-150635
lymphocyte antigen 6 complex, locus A
IDBP-790123
lymphocyte antigen 6 complex, locus A
IDBP-790126
lymphocyte antigen 6 complex, locus A
IDBP-790127
lymphocyte antigen 6 complex, locus A
IDBP-790128
lymphocyte antigen 6 complex, locus A
IDBP-790129
lymphocyte antigen 6 complex, locus A
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary Currently no Entrez Summary Available. You might want to check the Summary Sections of the Orthologs.
Gene Information
Type Protein coding
Genomic Location Chromosome 15:74994877-74998031
Strand Reverse strand
Band D3
Transcripts
ENSMUST00000023248 ENSMUSP00000023248
ENSMUST00000189068 ENSMUSP00000140638
ENSMUST00000187994 ENSMUSP00000140287
ENSMUST00000186526 ENSMUSP00000140998
ENSMUST00000187171 ENSMUSP00000140099
ENSMUST00000190188 ENSMUSP00000139488
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 2 experimentally validated interaction(s) in this database.
Experimentally validated
Total 2 [view]
Protein-Protein 1 [view]
Protein-DNA 1 [view]
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Gene Ontology

Molecular Function
Accession GO Term
Biological Process
Cellular Component
GO:0005622 intracellular
GO:0009897 external side of plasma membrane
GO:0031225 anchored component of membrane
Orthologs
No orthologs found for this gene
Cross-References
SwissProt
TrEMBL
UniProt Splice Variant
Entrez Gene
UniGene
RefSeq NM_001271416 NM_001271417 NM_001271418 NM_001271419 NM_001271446 NM_010738
OMIM
CCDS CCDS27540
HPRD
IMGT
MGI ID
MGI Symbol
EMBL
GenPept
RNA Seq Atlas

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca