Version 5.4
Mus musculus Gene: Nop16
Summary
InnateDB Gene IDBG-153795.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Nop16
Gene Name NOP16 nucleolar protein homolog (yeast)
Synonyms AA409471; D13Wsu177e
Species Mus musculus
Ensembl Gene ENSMUSG00000025869
Encoded Proteins
IDBP-153797
NOP16 nucleolar protein homolog (yeast)
IDBP-542717
NOP16 nucleolar protein homolog (yeast)
IDBP-536787
NOP16 nucleolar protein homolog (yeast)
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000048162:
NOP16 is transcriptionally regulated by c-Myc (MYC; MIM 190080), upregulated in breast cancer, and overexpression is associated with poor patient survival (Butt et al., 2008).[supplied by OMIM, Jun 2009]
Gene Information
Type Protein coding
Genomic Location Chromosome 13:54584185-54590090
Strand Reverse strand
Band B1
Transcripts
ENSMUST00000026987 ENSMUSP00000026987
ENSMUST00000148222 ENSMUSP00000122180
ENSMUST00000149462 ENSMUSP00000114954
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 3 experimentally validated interaction(s) in this database.
They are also associated with 13 interaction(s) predicted by orthology.
Experimentally validated
Total 3 [view]
Protein-Protein 3 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 13 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0044822 poly(A) RNA binding
Biological Process
GO:0008150 biological_process
Cellular Component
GO:0005634 nucleus
GO:0005730 nucleolus
GO:0043231 intracellular membrane-bounded organelle
Orthologs
Species
Homo sapiens
Bos taurus
Gene ID
Gene Order
ENSG00000048162
View Gene Order
ENSBTAG00000010734
Not yet available
Cross-References
SwissProt Q9CPT5
TrEMBL D3Z7M5 D6RDE0
UniProt Splice Variant
Entrez Gene 28126
UniGene Mm.403149 Mm.439993
RefSeq NM_178605
OMIM
CCDS CCDS26531
HPRD
IMGT
MGI ID MGI:107862
MGI Symbol Nop16
EMBL AC155262 AK002696 AK013251 AK088248 BC012213
GenPept AAH12213 BAB22290 BAB28746 BAC40235
RNA Seq Atlas 28126

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca