Version 5.4
Mus musculus Gene: Rps19
Summary
InnateDB Gene IDBG-155745.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Rps19
Gene Name ribosomal protein S19
Synonyms Dsk3
Species Mus musculus
Ensembl Gene ENSMUSG00000040952
Encoded Proteins
IDBP-264553
ribosomal protein S19
IDBP-264555
ribosomal protein S19
IDBP-264557
ribosomal protein S19
IDBP-788429
ribosomal protein S19
IDBP-542618
ribosomal protein S19
IDBP-534120
ribosomal protein S19
IDBP-536823
ribosomal protein S19
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary Currently no Entrez Summary Available. You might want to check the Summary Sections of the Orthologs.
Gene Information
Type Protein coding
Genomic Location Chromosome 7:24884371-24889806
Strand Forward strand
Band A3
Transcripts
ENSMUST00000108430 ENSMUSP00000104068
ENSMUST00000108429 ENSMUSP00000104067
ENSMUST00000108428 ENSMUSP00000104066
ENSMUST00000129847 ENSMUSP00000138466
ENSMUST00000138662
ENSMUST00000153451 ENSMUSP00000114949
ENSMUST00000156372 ENSMUSP00000120774
ENSMUST00000124035 ENSMUSP00000116311
ENSMUST00000130335
ENSMUST00000146004
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 21 experimentally validated interaction(s) in this database.
Experimentally validated
Total 21 [view]
Protein-Protein 20 [view]
Protein-DNA 1 [view]
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Gene Ontology

Molecular Function
Accession GO Term
GO:0003735 structural constituent of ribosome
GO:0005515 protein binding
GO:0017134 fibroblast growth factor binding
GO:0019901 protein kinase binding
GO:0042803 protein homodimerization activity
GO:0044822 poly(A) RNA binding
Biological Process
GO:0000028 ribosomal small subunit assembly
GO:0000462 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0002548 monocyte chemotaxis
GO:0006364 rRNA processing
GO:0006412 translation
GO:0007000 nucleolus organization
GO:0030218 erythrocyte differentiation
GO:0030490 maturation of SSU-rRNA
GO:0042274 ribosomal small subunit biogenesis
GO:0051262 protein tetramerization
GO:0060265 positive regulation of respiratory burst involved in inflammatory response
GO:0060266 negative regulation of respiratory burst involved in inflammatory response
Cellular Component
GO:0005622 intracellular
GO:0005730 nucleolus
GO:0005737 cytoplasm
GO:0005829 cytosol
GO:0005840 ribosome
GO:0016020 membrane
GO:0022627 cytosolic small ribosomal subunit
GO:0070062 extracellular vesicular exosome
Orthologs
No orthologs found for this gene
Pathways
NETPATH
REACTOME
REACT_253640
Peptide chain elongation pathway
REACT_255163
Activation of the mRNA upon binding of the cap-binding complex and eIFs, and subsequent binding to 43S pathway
REACT_254308
Translation pathway
REACT_231519
Eukaryotic Translation Termination pathway
REACT_256488
Translation initiation complex formation pathway
REACT_198522
Nonsense-Mediated Decay (NMD) pathway
REACT_247926
Metabolism of proteins pathway
REACT_198528
Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC) pathway
REACT_198524
Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC) pathway
REACT_229570
Cap-dependent Translation Initiation pathway
REACT_262064
Eukaryotic Translation Initiation pathway
REACT_196445
SRP-dependent cotranslational protein targeting to membrane pathway
REACT_232254
Eukaryotic Translation Elongation pathway
REACT_249044
Formation of a pool of free 40S subunits pathway
REACT_233572
Gene Expression pathway
REACT_259469
L13a-mediated translational silencing of Ceruloplasmin expression pathway
REACT_236458
Ribosomal scanning and start codon recognition pathway
REACT_262078
GTP hydrolysis and joining of the 60S ribosomal subunit pathway
REACT_249316
Formation of the ternary complex, and subsequently, the 43S complex pathway
KEGG
mmu03010
Ribosome pathway
INOH
PID NCI
Cross-References
SwissProt
TrEMBL D3YUG3
UniProt Splice Variant
Entrez Gene 20085
UniGene Mm.242170 Mm.300281 Mm.420756 Mm.425894 Mm.430769
RefSeq NM_023133 XM_006539680 XM_006539681
OMIM
CCDS CCDS20966
HPRD
IMGT
MGI ID MGI:1333780
MGI Symbol Rps19
EMBL AC161441
GenPept
RNA Seq Atlas 20085

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca