Version 5.4
| Mus musculus Gene: Sema5b | |||||||
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| Summary | |||||||
| InnateDB Gene | IDBG-156960.6 | ||||||
| Last Modified | 2014-10-13 [Report errors or provide feedback] | ||||||
| Gene Symbol | Sema5b | ||||||
| Gene Name | sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5B | ||||||
| Synonyms | AI893641; mKIAA1445; Semag; SemG | ||||||
| Species | Mus musculus | ||||||
| Ensembl Gene | ENSMUSG00000052133 | ||||||
| Encoded Proteins |
sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5B
sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5B
sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5B
sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5B
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| Protein Structure |
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| Useful resources | Stemformatics EHFPI ImmGen | ||||||
| Entrez Gene | |||||||
| Summary |
This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000082684:
This gene encodes a member of the semaphorin protein family which regulates axon growth during development of the nervous system. The encoded protein has a characteristic Sema domain near the N-terminus, through which semaphorins bind to plexin, and five thrombospondin type 1 repeats in the C-terminal region of the protein. The protein product may be cleaved and exist as a secreted molecule (PMID: 19463192). Multiple transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Jan 2012] |
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| Gene Information | |||||||
| Type | Protein coding | ||||||
| Genomic Location | Chromosome 16:35541145-35664732 | ||||||
| Strand | Forward strand | ||||||
| Band | B3 | ||||||
| Transcripts | |||||||
| Interactions | |||||||
| Number of Interactions |
This gene and/or its encoded proteins are associated with 0 experimentally validated interaction(s) in this database.
They are also associated with 7 interaction(s) predicted by orthology.
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| Gene Ontology | |||||||
Molecular Function |
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| Biological Process |
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| Cellular Component |
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| Orthologs | |||||||
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Species
Homo sapiens
Bos taurus
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Gene ID
Gene Order
Not yet available
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| Pathways | |||||||
| NETPATH | |||||||
| REACTOME | |||||||
| KEGG |
Axon guidance pathway
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| INOH | |||||||
| PID NCI | |||||||
| Pathway Predictions based on Human Orthology Data | |||||||
| NETPATH | |||||||
| REACTOME |
Post-translational protein modification pathway
O-linked glycosylation pathway
Metabolism of proteins pathway
O-glycosylation of TSR domain-containing proteins pathway
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| KEGG |
Axon guidance pathway
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| INOH | |||||||
| PID NCI | |||||||
| Cross-References | |||||||
| SwissProt | Q60519 | ||||||
| TrEMBL | |||||||
| UniProt Splice Variant | |||||||
| Entrez Gene | 20357 | ||||||
| UniGene | Mm.42015 Mm.462181 | ||||||
| RefSeq | NM_013661 XM_006521868 XM_006521867 XM_006521869 XM_006521870 | ||||||
| OMIM | |||||||
| CCDS | CCDS28140 | ||||||
| HPRD | |||||||
| IMGT | |||||||
| MGI ID | MGI:107555 | ||||||
| MGI Symbol | Sema5b | ||||||
| EMBL | AC154653 AK078659 AK129362 BC052397 CH466521 CT010576 X97818 | ||||||
| GenPept | AAH52397 BAC37350 BAC98172 CAA66398 CAP19226 EDK97889 | ||||||
| RNA Seq Atlas | 20357 | ||||||