Version 5.4
Mus musculus Gene: Rab39b
Summary
InnateDB Gene IDBG-157512.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Rab39b
Gene Name RAB39B, member RAS oncogene family
Synonyms 6330580M05Rik
Species Mus musculus
Ensembl Gene ENSMUSG00000031202
Encoded Proteins
IDBP-157514
RAB39B, member RAS oncogene family
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene encodes a member of the Ras-related small GTPases, which regulate membrane trafficking in organelles and transport vesicles. This protein has been reported to be enriched in mouse brain, and specifically within neurons, and may play a role in synapse formation. In humans mutations in this gene are associated with X-linked mental retardation. [provided by RefSeq, Jun 2013]
Gene Information
Type Protein coding
Genomic Location Chromosome X:75572046-75578231
Strand Reverse strand
Band A7.3
Transcripts
ENSMUST00000033545 ENSMUSP00000033545
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 0 experimentally validated interaction(s) in this database.
They are also associated with 4 interaction(s) predicted by orthology.
Predicted by orthology
Total 4 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0003924 GTPase activity
GO:0005515 protein binding
GO:0005525 GTP binding
Biological Process
GO:0006184 GTP catabolic process
GO:0006886 intracellular protein transport
GO:0006913 nucleocytoplasmic transport
GO:0007165 signal transduction
GO:0007264 small GTPase mediated signal transduction
GO:0015031 protein transport
GO:0016192 vesicle-mediated transport
GO:0050808 synapse organization
Cellular Component
GO:0005622 intracellular
GO:0005634 nucleus
GO:0005737 cytoplasm
GO:0005794 Golgi apparatus
GO:0005886 plasma membrane
GO:0016020 membrane
Orthologs
Species
Homo sapiens
Bos taurus
Gene ID
Gene Order
ENSG00000155961
View Gene Order
ENSBTAG00000019779
Not yet available
Cross-References
SwissProt Q8BHC1
TrEMBL Q0PD14
UniProt Splice Variant
Entrez Gene 67790
UniGene Mm.437356 Mm.45148
RefSeq NM_175122
OMIM
CCDS CCDS30242
HPRD
IMGT
MGI ID MGI:1915040
MGI Symbol Rab39b
EMBL AB232636 AK039013 AK048981 AK160737 BC050853 BC052472 CH466576
GenPept AAH50853 AAH52472 BAC30206 BAC33503 BAE35978 BAF02898 EDL29220
RNA Seq Atlas 67790

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca