Version 5.4
Mus musculus Gene: Snrnp25
Summary
InnateDB Gene IDBG-159620.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Snrnp25
Gene Name small nuclear ribonucleoprotein 25 (U11/U12)
Synonyms 3300001G02Rik; AL033324; C16ORF33
Species Mus musculus
Ensembl Gene ENSMUSG00000040767
Encoded Proteins
IDBP-159622
small nuclear ribonucleoprotein 25 (U11/U12)
IDBP-400940
small nuclear ribonucleoprotein 25 (U11/U12)
IDBP-539409
small nuclear ribonucleoprotein 25 (U11/U12)
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000161981:
Two types of spliceosomes catalyze splicing of pre-mRNAs. The major U2-type spliceosome is found in all eukaryotes and removes U2-type introns, which represent more than 99% of pre-mRNA introns. The minor U12-type spliceosome is found in some eukaryotes and removes U12-type introns, which are rare and have distinct splice consensus signals. The U12-type spliceosome consists of several small nuclear RNAs and associated proteins. This gene encodes a 25K protein that is a component of the U12-type spliceosome. [provided by RefSeq, Apr 2010]
Gene Information
Type Protein coding
Genomic Location Chromosome 11:32205415-32208984
Strand Forward strand
Band A4
Transcripts
ENSMUST00000039601 ENSMUSP00000046654
ENSMUST00000121182 ENSMUSP00000112483
ENSMUST00000149043 ENSMUSP00000119306
ENSMUST00000155736
ENSMUST00000125837
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 0 experimentally validated interaction(s) in this database.
They are also associated with 1 interaction(s) predicted by orthology.
Predicted by orthology
Total 1 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0003674 molecular_function
Biological Process
GO:0006397 mRNA processing
GO:0008150 biological_process
GO:0008380 RNA splicing
Cellular Component
GO:0005634 nucleus
GO:0005689 U12-type spliceosomal complex
GO:0005737 cytoplasm
GO:0045171 intercellular bridge
Orthologs
Species
Homo sapiens
Bos taurus
Gene ID
Gene Order
ENSG00000161981
View Gene Order
ENSBTAG00000019804
Not yet available
Cross-References
SwissProt Q8VIK1
TrEMBL
UniProt Splice Variant
Entrez Gene 78372
UniGene Mm.29952
RefSeq NM_030093
OMIM
CCDS CCDS24518
HPRD
IMGT
MGI ID MGI:1925622
MGI Symbol Snrnp25
EMBL AK019452 AY016021 BC028766
GenPept AAH28766 AAL32366 BAB31728
RNA Seq Atlas 78372

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca