Version 5.4
Mus musculus Gene: Ttc39b
Summary
InnateDB Gene IDBG-159916.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Ttc39b
Gene Name tetratricopeptide repeat domain 39B
Synonyms 1810054D07Rik; 9130422G05Rik; AI450603; AV103077; AW215585
Species Mus musculus
Ensembl Gene ENSMUSG00000038172
Encoded Proteins
IDBP-159918
tetratricopeptide repeat domain 39B
IDBP-159922
tetratricopeptide repeat domain 39B
IDBP-159924
tetratricopeptide repeat domain 39B
IDBP-541641
tetratricopeptide repeat domain 39B
IDBP-538253
tetratricopeptide repeat domain 39B
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000155158:
Gene Information
Type Protein coding
Genomic Location Chromosome 4:83220300-83324255
Strand Reverse strand
Band C3
Transcripts
ENSMUST00000102823 ENSMUSP00000099887
ENSMUST00000048274 ENSMUSP00000040590
ENSMUST00000030205 ENSMUSP00000030205
ENSMUST00000143362
ENSMUST00000146519
ENSMUST00000150522 ENSMUSP00000124955
ENSMUST00000148811 ENSMUSP00000124490
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 1 experimentally validated interaction(s) in this database.
They are also associated with 1 interaction(s) predicted by orthology.
Experimentally validated
Total 1 [view]
Protein-Protein 0
Protein-DNA 1 [view]
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 1 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0003674 molecular_function
Biological Process
GO:0008150 biological_process
Cellular Component
GO:0005575 cellular_component
Orthologs
Species
Homo sapiens
Bos taurus
Gene ID
Gene Order
ENSG00000155158
View Gene Order
ENSBTAG00000003943
Not yet available
Cross-References
SwissProt
TrEMBL E0CX38
UniProt Splice Variant
Entrez Gene 69863
UniGene Mm.474719 Mm.5540
RefSeq NM_027238 XM_006538239
OMIM
CCDS CCDS18297
HPRD
IMGT
MGI ID MGI:1917113
MGI Symbol Ttc39b
EMBL BX571885
GenPept
RNA Seq Atlas 69863

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca