Version 5.4
Mus musculus Gene: Lsamp
Summary
InnateDB Gene IDBG-160888.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Lsamp
Gene Name limbic system-associated membrane protein
Synonyms
Species Mus musculus
Ensembl Gene ENSMUSG00000061080
Encoded Proteins
IDBP-160890
limbic system-associated membrane protein
IDBP-160892
limbic system-associated membrane protein
IDBP-537381
limbic system-associated membrane protein
IDBP-790233
limbic system-associated membrane protein
IDBP-790226
limbic system-associated membrane protein
IDBP-790228
limbic system-associated membrane protein
IDBP-790230
limbic system-associated membrane protein
IDBP-790231
limbic system-associated membrane protein
IDBP-790232
limbic system-associated membrane protein
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000185565:
The protein encoded by this gene is a neuronal surface glycoprotein found in cortical and subcortical regions of the limbic system. During development of the limbic system, this encoded protein is found on the surface of axonal membranes and growth cones, where it acts as a selective homophilic adhesion molecule, and guides the development of specific patterns of neuronal connections. [provided by RefSeq, Jul 2008]
Gene Information
Type Protein coding
Genomic Location Chromosome 16:39984361-42181679
Strand Forward strand
Band B4
Transcripts
ENSMUST00000099761 ENSMUSP00000097349
ENSMUST00000078873 ENSMUSP00000077913
ENSMUST00000145951 ENSMUSP00000115823
ENSMUST00000133853 ENSMUSP00000139655
ENSMUST00000189229 ENSMUSP00000139814
ENSMUST00000187695 ENSMUSP00000139667
ENSMUST00000189358 ENSMUSP00000139449
ENSMUST00000191610 ENSMUSP00000140114
ENSMUST00000189829
ENSMUST00000187185 ENSMUSP00000139576
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 3 experimentally validated interaction(s) in this database.
They are also associated with 2 interaction(s) predicted by orthology.
Experimentally validated
Total 3 [view]
Protein-Protein 3 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 2 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0005515 protein binding
Biological Process
GO:0007155 cell adhesion
GO:0035641 locomotory exploration behavior
Cellular Component
GO:0005886 plasma membrane
GO:0031225 anchored component of membrane
Orthologs
Species
Homo sapiens
Gene ID
Gene Order
ENSG00000185565
View Gene Order
Cross-References
SwissProt
TrEMBL
UniProt Splice Variant
Entrez Gene
UniGene Mm.397841 Mm.473653 Mm.487868
RefSeq NM_175548 XM_006522202
OMIM
CCDS CCDS28176
HPRD
IMGT
MGI ID
MGI Symbol
EMBL
GenPept
RNA Seq Atlas

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca