Version 5.4
Mus musculus Gene: Syngr1
Summary
InnateDB Gene IDBG-163370.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Syngr1
Gene Name synaptogyrin 1
Synonyms p29; R75468; Syngr1b
Species Mus musculus
Ensembl Gene ENSMUSG00000022415
Encoded Proteins
IDBP-163372
synaptogyrin 1
IDBP-163374
synaptogyrin 1
IDBP-542107
synaptogyrin 1
IDBP-537655
synaptogyrin 1
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000100321:
This gene encodes an integral membrane protein associated with presynaptic vesicles in neuronal cells. The exact function of this protein is unclear, but studies of a similar murine protein suggest that it functions in synaptic plasticity without being required for synaptic transmission. The gene product belongs to the synaptogyrin gene family. Three alternatively spliced variants encoding three different isoforms have been identified. [provided by RefSeq, Jul 2008]
Gene Information
Type Protein coding
Genomic Location Chromosome 15:80091334-80119501
Strand Forward strand
Band E1
Transcripts
ENSMUST00000009727 ENSMUSP00000009727
ENSMUST00000009728 ENSMUSP00000009728
ENSMUST00000143928 ENSMUSP00000120696
ENSMUST00000135727 ENSMUSP00000121716
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 1 experimentally validated interaction(s) in this database.
They are also associated with 1 interaction(s) predicted by orthology.
Experimentally validated
Total 1 [view]
Protein-Protein 1 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 1 [view]
Gene Ontology

Molecular Function
Accession GO Term
Biological Process
GO:0006605 protein targeting
GO:0048169 regulation of long-term neuronal synaptic plasticity
GO:0048172 regulation of short-term neuronal synaptic plasticity
Cellular Component
GO:0008021 synaptic vesicle
GO:0016020 membrane
GO:0016021 integral component of membrane
GO:0030054 cell junction
GO:0030672 synaptic vesicle membrane
GO:0042470 melanosome
Orthologs
Species
Homo sapiens
Bos taurus
Gene ID
Gene Order
ENSG00000100321
View Gene Order
ENSBTAG00000005765
Not yet available
Cross-References
SwissProt
TrEMBL D3YWY9
UniProt Splice Variant
Entrez Gene 20972
UniGene Mm.230301 Mm.409178 Mm.416576
RefSeq NM_009303 NM_207708 XM_006520695
OMIM
CCDS CCDS27657 CCDS27658
HPRD
IMGT
MGI ID MGI:1328323
MGI Symbol Syngr1
EMBL AC161199
GenPept
RNA Seq Atlas 20972

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca