Version 5.4
Mus musculus Gene: Ebf1
Summary
InnateDB Gene IDBG-164722.7
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Ebf1
Gene Name early B cell factor 1
Synonyms Ebf; O/E-1; OE-1; Olf-1; Olf1
Species Mus musculus
Ensembl Gene ENSMUSG00000057098
Encoded Proteins
IDBP-164724
early B-cell factor 1
IDBP-164726
early B-cell factor 1
IDBP-262765
early B-cell factor 1
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000164330:
Gene Information
Type Protein coding
Genomic Location Chromosome 11:44617317-45008091
Strand Forward strand
Band B1.1
Transcripts
ENSMUST00000101326 ENSMUSP00000099857
ENSMUST00000081265 ENSMUSP00000080020
ENSMUST00000109268 ENSMUSP00000104891
ENSMUST00000149997
ENSMUST00000135993
ENSMUST00000138452
ENSMUST00000140822
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 13 experimentally validated interaction(s) in this database.
They are also associated with 3 interaction(s) predicted by orthology.
Experimentally validated
Total 13 [view]
Protein-Protein 1 [view]
Protein-DNA 11 [view]
Protein-RNA 1 [view]
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 3 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0003677 DNA binding
GO:0003700 sequence-specific DNA binding transcription factor activity
GO:0005515 protein binding
GO:0046872 metal ion binding
GO:0046983 protein dimerization activity
GO:0070742 C2H2 zinc finger domain binding
Biological Process
GO:0006351 transcription, DNA-templated
GO:0006355 regulation of transcription, DNA-templated
GO:0007275 multicellular organismal development
GO:0045893 positive regulation of transcription, DNA-templated
Cellular Component
GO:0005634 nucleus
GO:0005654 nucleoplasm
Orthologs
Species
Homo sapiens
Bos taurus
Gene ID
Gene Order
ENSG00000164330
View Gene Order
ENSBTAG00000037508
Not yet available
Pathways
NETPATH
REACTOME
REACT_27166
Transcriptional Regulation of Adipocyte Differentiation in 3T3-L1 Pre-adipocytes pathway
REACT_252217
Transcriptional regulation of white adipocyte differentiation pathway
REACT_200794
Mus musculus biological processes pathway
REACT_188576
Developmental Biology pathway
KEGG
INOH
PID NCI
Pathway Predictions based on Human Orthology Data
NETPATH
REACTOME
REACT_27161
Transcriptional regulation of white adipocyte differentiation pathway
REACT_111045
Developmental Biology pathway
KEGG
INOH
PID NCI
Cross-References
SwissProt Q07802
TrEMBL Q3V317 Q5SWK4 Q5SWK5 Q5SWK8 Q8CBL7
UniProt Splice Variant
Entrez Gene 13591
UniGene Mm.395653 Mm.404134 Mm.414172 Mm.440837
RefSeq NM_001290709 NM_007897 XM_006532154 XM_006532155
OMIM
CCDS CCDS24566 CCDS70165
HPRD
IMGT
MGI ID MGI:95275
MGI Symbol Ebf1
EMBL AK035781 AK051438 AK141175 AL603913 AL645607 AL672013 AL732622 BC139362 BC139364 CH466575 L12147
GenPept AAA37533 AAI39363 AAI39365 BAC29185 BAE24573 BAE43347 EDL33837
RNA Seq Atlas 13591

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca