Version 5.4
Mus musculus Gene: Rrp1b
Summary
InnateDB Gene IDBG-164951.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Rrp1b
Gene Name ribosomal RNA processing 1 homolog B (S. cerevisiae)
Synonyms 2600005C20Rik; D030064A17; Kiaa0179; mKIAA0179
Species Mus musculus
Ensembl Gene ENSMUSG00000058392
Encoded Proteins
IDBP-164953
ribosomal RNA processing 1 homolog B (S. cerevisiae)
IDBP-539895
ribosomal RNA processing 1 homolog B (S. cerevisiae)
IDBP-533765
ribosomal RNA processing 1 homolog B (S. cerevisiae)
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000160208:
Gene Information
Type Protein coding
Genomic Location Chromosome 17:32036100-32062865
Strand Forward strand
Band B1
Transcripts
ENSMUST00000081339 ENSMUSP00000080085
ENSMUST00000156164
ENSMUST00000151808 ENSMUSP00000123044
ENSMUST00000147076
ENSMUST00000149746
ENSMUST00000150151
ENSMUST00000150469 ENSMUSP00000117400
ENSMUST00000136094
ENSMUST00000137917
ENSMUST00000150187
ENSMUST00000126602
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 46 experimentally validated interaction(s) in this database.
They are also associated with 39 interaction(s) predicted by orthology.
Experimentally validated
Total 46 [view]
Protein-Protein 46 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 39 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0005488 binding
GO:0005515 protein binding
GO:0044822 poly(A) RNA binding
Biological Process
GO:0006364 rRNA processing
GO:0010923 negative regulation of phosphatase activity
Cellular Component
GO:0000791 euchromatin
GO:0000792 heterochromatin
GO:0005634 nucleus
GO:0005730 nucleolus
GO:0005829 cytosol
GO:0030688 preribosome, small subunit precursor
Orthologs
Species
Homo sapiens
Bos taurus
Gene ID
Gene Order
ENSG00000160208
View Gene Order
ENSBTAG00000017418
Not yet available
Cross-References
SwissProt
TrEMBL
UniProt Splice Variant
Entrez Gene
UniGene Mm.102761
RefSeq NM_001163734 NM_028244 XM_006524971 XM_006524972
OMIM
CCDS CCDS28613
HPRD
IMGT
MGI ID
MGI Symbol
EMBL
GenPept
RNA Seq Atlas

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca