Version 5.4
Mus musculus Gene: Use1
Summary
InnateDB Gene IDBG-165283.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Use1
Gene Name unconventional SNARE in the ER 1 homolog (S. cerevisiae)
Synonyms 2010315L10Rik; 5730403H22Rik; AV002165; D12; Ed2; p31; Q-snare
Species Mus musculus
Ensembl Gene ENSMUSG00000002395
Encoded Proteins
IDBP-165285
unconventional SNARE in the ER 1 homolog (S. cerevisiae)
IDBP-261086
unconventional SNARE in the ER 1 homolog (S. cerevisiae)
IDBP-261088
unconventional SNARE in the ER 1 homolog (S. cerevisiae)
IDBP-541942
unconventional SNARE in the ER 1 homolog (S. cerevisiae)
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000053501:
Gene Information
Type Protein coding
Genomic Location Chromosome 8:71366848-71369732
Strand Forward strand
Band B3.3
Transcripts
ENSMUST00000019169 ENSMUSP00000019169
ENSMUST00000110054 ENSMUSP00000105681
ENSMUST00000110053 ENSMUSP00000105680
ENSMUST00000139541 ENSMUSP00000122406
ENSMUST00000154550
ENSMUST00000143657
ENSMUST00000146221
ENSMUST00000136368
ENSMUST00000142685
ENSMUST00000127517
ENSMUST00000140236
ENSMUST00000137137
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 2 experimentally validated interaction(s) in this database.
They are also associated with 3 interaction(s) predicted by orthology.
Experimentally validated
Total 2 [view]
Protein-Protein 2 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 3 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0005515 protein binding
Biological Process
GO:0007029 endoplasmic reticulum organization
GO:0015031 protein transport
GO:0016192 vesicle-mediated transport
GO:0060628 regulation of ER to Golgi vesicle-mediated transport
GO:0071786 endoplasmic reticulum tubular network organization
Cellular Component
GO:0005783 endoplasmic reticulum
GO:0005789 endoplasmic reticulum membrane
GO:0016021 integral component of membrane
Orthologs
Species
Homo sapiens
Bos taurus
Gene ID
Gene Order
ENSG00000053501
View Gene Order
ENSBTAG00000011134
Not yet available
Pathways
NETPATH
REACTOME
KEGG
mmu04130
SNARE interactions in vesicular transport pathway
INOH
PID NCI
Pathway Predictions based on Human Orthology Data
NETPATH
REACTOME
KEGG
hsa04130
SNARE interactions in vesicular transport pathway
INOH
PID NCI
Cross-References
SwissProt Q9CQ56
TrEMBL D3Z6D3 E9Q496 Q05CJ0
UniProt Splice Variant
Entrez Gene 67023
UniGene Mm.41890 Mm.468693 Mm.480877
RefSeq NM_001145780 NM_025917 XM_006509724 XM_006509725 XM_006509726
OMIM
CCDS CCDS22390 CCDS52582
HPRD
IMGT
MGI ID MGI:1914273
MGI Symbol Use1
EMBL AC127416 AC157609 AF353245 AK008573 AK012490 AK160726 BC025086 BC038519 BC075695
GenPept AAH25086 AAH38519 AAH75695 AAK26661 BAB25752 BAB28275 BAE35971
RNA Seq Atlas 67023

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca