Version 5.4
Mus musculus Gene: Csdc2
Summary
InnateDB Gene IDBG-165660.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Csdc2
Gene Name cold shock domain containing C2, RNA binding
Synonyms AI415250; AI481750; Pippin
Species Mus musculus
Ensembl Gene ENSMUSG00000042109
Encoded Proteins
IDBP-165662
cold shock domain containing C2, RNA binding
IDBP-536077
cold shock domain containing C2, RNA binding
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000172346:
Gene Information
Type Protein coding
Genomic Location Chromosome 15:81936759-81950941
Strand Forward strand
Band E1
Transcripts
ENSMUST00000038757 ENSMUSP00000044441
ENSMUST00000135663 ENSMUSP00000121080
ENSMUST00000140209
ENSMUST00000152678
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 2 experimentally validated interaction(s) in this database.
They are also associated with 4 interaction(s) predicted by orthology.
Experimentally validated
Total 2 [view]
Protein-Protein 2 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 4 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0003676 nucleic acid binding
GO:0003677 DNA binding
GO:0003723 RNA binding
Biological Process
GO:0006355 regulation of transcription, DNA-templated
GO:0006397 mRNA processing
GO:0008150 biological_process
Cellular Component
GO:0005634 nucleus
GO:0005737 cytoplasm
Orthologs
Species
Homo sapiens
Bos taurus
Gene ID
Gene Order
ENSG00000172346
View Gene Order
ENSBTAG00000004004
Not yet available
Cross-References
SwissProt
TrEMBL
UniProt Splice Variant
Entrez Gene
UniGene Mm.22524
RefSeq NM_145473
OMIM
CCDS CCDS27677
HPRD
IMGT
MGI ID
MGI Symbol
EMBL
GenPept
RNA Seq Atlas

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca