Version 5.4
Mus musculus Gene: Glt25d1
Summary
InnateDB Gene IDBG-166234.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Glt25d1
Gene Name glycosyltransferase 25 domain containing 1
Synonyms
Species Mus musculus
Ensembl Gene ENSMUSG00000034807
Encoded Proteins
IDBP-166236
glycosyltransferase 25 domain containing 1
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000130309:
Gene Information
Type Protein coding
Genomic Location Chromosome 8:71611024-71624909
Strand Forward strand
Band B3.3
Transcripts
ENSMUST00000047903 ENSMUSP00000047923
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 3 experimentally validated interaction(s) in this database.
They are also associated with 8 interaction(s) predicted by orthology.
Experimentally validated
Total 3 [view]
Protein-Protein 3 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 8 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0003674 molecular_function
GO:0050211 procollagen galactosyltransferase activity
Biological Process
GO:0009103 lipopolysaccharide biosynthetic process
Cellular Component
GO:0005788 endoplasmic reticulum lumen
GO:0016020 membrane
Orthologs
Species
Homo sapiens
Bos taurus
Gene ID
Gene Order
ENSG00000130309
View Gene Order
ENSBTAG00000012678
Not yet available
Pathways
NETPATH
REACTOME
REACT_199045
Collagen formation pathway
REACT_198984
Collagen biosynthesis and modifying enzymes pathway
REACT_206066
Extracellular matrix organization pathway
KEGG
mmu00310
Lysine degradation pathway
mmu00514
Other types of O-glycan biosynthesis pathway
INOH
PID NCI
Pathway Predictions based on Human Orthology Data
NETPATH
REACTOME
REACT_121139
Collagen biosynthesis and modifying enzymes pathway
REACT_118779
Extracellular matrix organization pathway
REACT_120729
Collagen formation pathway
REACT_206550
Collagen formation pathway
REACT_215758
Collagen biosynthesis and modifying enzymes pathway
REACT_223425
Extracellular matrix organization pathway
KEGG
hsa00310
Lysine degradation pathway
hsa00514
Other types of O-glycan biosynthesis pathway
INOH
PID NCI
Cross-References
SwissProt Q8K297
TrEMBL
UniProt Splice Variant
Entrez Gene 234407
UniGene Mm.273836
RefSeq NM_146211
OMIM
CCDS CCDS22401
HPRD
IMGT
MGI ID MGI:1924348
MGI Symbol Colgalt1
EMBL AK035788 BC032165 BC056951
GenPept AAH32165 AAH56951 BAE43293
RNA Seq Atlas 234407

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca