Version 5.4
Mus musculus Gene: Brd1
Summary
InnateDB Gene IDBG-171566.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Brd1
Gene Name bromodomain containing 1
Synonyms
Species Mus musculus
Ensembl Gene ENSMUSG00000022387
Encoded Proteins
IDBP-171570
bromodomain containing 1
IDBP-262505
bromodomain containing 1
IDBP-262507
bromodomain containing 1
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000100425:
This gene encodes a protein of unknown function. The protein contains a bromodomain, a sequence motif often found in transcriptional coactivators, and localizes to the nucleus in testis and several other cell types. [provided by RefSeq, Jul 2008]
Gene Information
Type Protein coding
Genomic Location Chromosome 15:88687300-88734233
Strand Reverse strand
Band E3
Transcripts
ENSMUST00000088911 ENSMUSP00000086300
ENSMUST00000109381 ENSMUSP00000105007
ENSMUST00000109380 ENSMUSP00000105006
ENSMUST00000150004
ENSMUST00000156155
ENSMUST00000139515
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 0 experimentally validated interaction(s) in this database.
They are also associated with 10 interaction(s) predicted by orthology.
Predicted by orthology
Total 10 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0005515 protein binding
GO:0008270 zinc ion binding
GO:0042393 histone binding
Biological Process
GO:0043966 histone H3 acetylation
Cellular Component
GO:0005634 nucleus
GO:0070776 MOZ/MORF histone acetyltransferase complex
Orthologs
Species
Homo sapiens
Bos taurus
Gene ID
Gene Order
ENSG00000100425
View Gene Order
ENSBTAG00000046760
Not yet available
Pathway Predictions based on Human Orthology Data
NETPATH
REACTOME
REACT_172610
HATs acetylate histones pathway
REACT_172623
Chromatin organization pathway
REACT_172633
Chromatin modifying enzymes pathway
KEGG
INOH
PID NCI
Cross-References
SwissProt
TrEMBL E9Q412 Q8BU83
UniProt Splice Variant
Entrez Gene 223770
UniGene Mm.254438
RefSeq NM_001033274 XM_006520835
OMIM
CCDS CCDS27730
HPRD
IMGT
MGI ID MGI:1924161
MGI Symbol Brd1
EMBL AC117700 AC158976 AK086982
GenPept BAC39779
RNA Seq Atlas 223770

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca