Version 5.4
Mus musculus Gene: Tmem48
Summary
InnateDB Gene IDBG-171596.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Tmem48
Gene Name transmembrane protein 48
Synonyms 2810475A17Rik; AI450313; Tmem48
Species Mus musculus
Ensembl Gene ENSMUSG00000028614
Encoded Proteins
IDBP-717440
IDBP-537946
transmembrane protein 48
IDBP-718696
IDBP-717296
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000058804:
Gene Information
Type Protein coding
Genomic Location Chromosome 4:107367784-107416346
Strand Forward strand
Band C7
Transcripts
ENSMUST00000030357 ENSMUSP00000136239
ENSMUST00000139560 ENSMUSP00000120365
ENSMUST00000149366 ENSMUSP00000137180
ENSMUST00000125342 ENSMUSP00000136850
ENSMUST00000150800
ENSMUST00000132950
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 2 experimentally validated interaction(s) in this database.
They are also associated with 3 interaction(s) predicted by orthology.
Experimentally validated
Total 2 [view]
Protein-Protein 2 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 3 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0017056 structural constituent of nuclear pore
Biological Process
GO:0007129 synapsis
GO:0007283 spermatogenesis
GO:0015031 protein transport
GO:0031081 nuclear pore distribution
GO:0051028 mRNA transport
GO:0051292 nuclear pore complex assembly
Cellular Component
GO:0005643 nuclear pore
GO:0005737 cytoplasm
GO:0016020 membrane
GO:0031965 nuclear membrane
Orthologs
Species
Homo sapiens
Bos taurus
Gene ID
Gene Order
ENSG00000058804
View Gene Order
ENSBTAG00000006625
Not yet available
Pathways
NETPATH
REACTOME
KEGG
mmu03013
RNA transport pathway
INOH
PID NCI
Pathway Predictions based on Human Orthology Data
NETPATH
REACTOME
KEGG
hsa03013
RNA transport pathway
INOH
PID NCI
Cross-References
SwissProt
TrEMBL
UniProt Splice Variant
Entrez Gene
UniGene Mm.28478 Mm.418685
RefSeq NM_028355 XM_006503422 XM_006503423
OMIM
CCDS CCDS18438
HPRD
IMGT
MGI ID
MGI Symbol
EMBL
GenPept
RNA Seq Atlas

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca