Version 5.4
Mus musculus Gene: Ly6g5c
Summary
InnateDB Gene IDBG-176576.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Ly6g5c
Gene Name lymphocyte antigen 6 complex, locus G5C
Synonyms
Species Mus musculus
Ensembl Gene ENSMUSG00000034482
Encoded Proteins
IDBP-176578
lymphocyte antigen 6 complex, locus G5C
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000204428:
LY6G5C belongs to a cluster of leukocyte antigen-6 (LY6) genes located in the major histocompatibility complex (MHC) class III region on chromosome 6. Members of the LY6 superfamily typically contain 70 to 80 amino acids, including 8 to 10 cysteines. Most LY6 proteins are attached to the cell surface by a glycosylphosphatidylinositol (GPI) anchor that is directly involved in signal transduction (Mallya et al., 2002 [PubMed 12079290]).[supplied by OMIM, Mar 2008]
Gene Information
Type Protein coding
Genomic Location Chromosome 17:35108279-35111991
Strand Forward strand
Band B1
Transcripts
ENSMUST00000037849 ENSMUSP00000039151
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 0 experimentally validated interaction(s) in this database.
Gene Ontology

Molecular Function
Accession GO Term
GO:0003674 molecular_function
Biological Process
GO:0008150 biological_process
Cellular Component
GO:0005575 cellular_component
GO:0005576 extracellular region
Orthologs
Species
Homo sapiens
Bos taurus
Gene ID
Gene Order
ENSG00000204428
View Gene Order
ENSBTAG00000025449
Not yet available
Cross-References
SwissProt Q8K1T5
TrEMBL
UniProt Splice Variant
Entrez Gene 114652
UniGene Mm.222643
RefSeq NM_148947
OMIM
CCDS CCDS28682
HPRD
IMGT
MGI ID MGI:2148974
MGI Symbol Ly6g5c
EMBL AJ315552 BC111447 BC145966 BC145968
GenPept AAI11448 AAI45967 AAI45969 CAC85548
RNA Seq Atlas 114652

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca