Version 5.4
Mus musculus Gene: Ubr3
Summary
InnateDB Gene IDBG-177565.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Ubr3
Gene Name ubiquitin protein ligase E3 component n-recognin 3
Synonyms 1110059H15Rik; 4833421P10Rik; A130030D10Rik; AA409735; AA414972; AA422631; AI646861; AU016126; Zfp650; Znf650
Species Mus musculus
Ensembl Gene ENSMUSG00000044308
Encoded Proteins
IDBP-177567
ubiquitin protein ligase E3 component n-recognin 3
IDBP-256399
ubiquitin protein ligase E3 component n-recognin 3
IDBP-536789
ubiquitin protein ligase E3 component n-recognin 3
IDBP-533634
ubiquitin protein ligase E3 component n-recognin 3
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000144357:
Gene Information
Type Protein coding
Genomic Location Chromosome 2:69897246-70024013
Strand Forward strand
Band C2
Transcripts
ENSMUST00000055758 ENSMUSP00000060159
ENSMUST00000112251 ENSMUSP00000107870
ENSMUST00000131553 ENSMUSP00000121401
ENSMUST00000142563
ENSMUST00000152610 ENSMUSP00000122027
ENSMUST00000126165
ENSMUST00000125608
ENSMUST00000150301
ENSMUST00000136543
ENSMUST00000123890
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 1 experimentally validated interaction(s) in this database.
They are also associated with 5 interaction(s) predicted by orthology.
Experimentally validated
Total 1 [view]
Protein-Protein 0
Protein-DNA 0
Protein-RNA 1 [view]
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 5 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0004842 ubiquitin-protein transferase activity
GO:0005515 protein binding
GO:0008270 zinc ion binding
GO:0016874 ligase activity
Biological Process
GO:0001701 in utero embryonic development
GO:0001967 suckling behavior
GO:0006511 ubiquitin-dependent protein catabolic process
GO:0007608 sensory perception of smell
GO:0009790 embryo development
GO:0016567 protein ubiquitination
GO:0042048 olfactory behavior
Cellular Component
GO:0005575 cellular_component
GO:0016021 integral component of membrane
Orthologs
Species
Homo sapiens
Bos taurus
Gene ID
Gene Order
ENSG00000144357
View Gene Order
ENSBTAG00000020296
Not yet available
Cross-References
SwissProt
TrEMBL
UniProt Splice Variant
Entrez Gene
UniGene Mm.314576 Mm.397374 Mm.470436
RefSeq NM_001081548 NM_177783 XM_006500115 XM_006500119
OMIM
CCDS CCDS16104
HPRD
IMGT
MGI ID
MGI Symbol
EMBL
GenPept
RNA Seq Atlas

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca