Version 5.4
Mus musculus Gene: Tro
Summary
InnateDB Gene IDBG-178292.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Tro
Gene Name trophinin
Synonyms AA409408; Maged3; Maged3l; magphinin; Tnn; Trol
Species Mus musculus
Ensembl Gene ENSMUSG00000025272
Encoded Proteins
IDBP-178294
trophinin
IDBP-178298
trophinin
IDBP-255445
trophinin
IDBP-538720
trophinin
IDBP-540404
trophinin
IDBP-625334
trophinin
IDBP-625336
trophinin
IDBP-625338
trophinin
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000067445:
This gene encodes a membrane protein that mediates cell adhesion between trophoblastic cells and the epithelial cells of the endometrium. The encoded protein participates in cell signalling during embryo implantation, and may also be involved in cancer formation. This gene is located near several other closely related genes on chromosome X. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Sep 2012]
Gene Information
Type Protein coding
Genomic Location Chromosome X:150645304-150657583
Strand Reverse strand
Band F3
Transcripts
ENSMUST00000087258 ENSMUSP00000084513
ENSMUST00000087253 ENSMUSP00000084508
ENSMUST00000112709 ENSMUSP00000108329
ENSMUST00000151403 ENSMUSP00000120457
ENSMUST00000148604 ENSMUSP00000116905
ENSMUST00000163969 ENSMUSP00000126054
ENSMUST00000164071 ENSMUSP00000126042
ENSMUST00000169450
ENSMUST00000163450 ENSMUSP00000127689
ENSMUST00000171775
ENSMUST00000165192
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 3 experimentally validated interaction(s) in this database.
They are also associated with 9 interaction(s) predicted by orthology.
Experimentally validated
Total 3 [view]
Protein-Protein 3 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 9 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0003674 molecular_function
GO:0005515 protein binding
Biological Process
GO:0030308 negative regulation of cell growth
Cellular Component
GO:0005634 nucleus
GO:0005737 cytoplasm
Orthologs
Species
Homo sapiens
Gene ID
Gene Order
ENSG00000067445
View Gene Order
Cross-References
SwissProt
TrEMBL
UniProt Splice Variant
Entrez Gene
UniGene Mm.3597
RefSeq NM_001002272 NM_001290770 NM_001290771 NM_001290772 NM_019548 XM_006528916 XM_006528919
OMIM
CCDS CCDS30465 CCDS53221 CCDS72448
HPRD
IMGT
MGI ID
MGI Symbol
EMBL
GenPept
RNA Seq Atlas

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca