Version 5.4
Mus musculus Gene: Igsf5
Summary
InnateDB Gene IDBG-179975.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Igsf5
Gene Name immunoglobulin superfamily, member 5
Synonyms 2010003D20Rik; Jam4; JCAM
Species Mus musculus
Ensembl Gene ENSMUSG00000000159
Encoded Proteins
IDBP-179977
immunoglobulin superfamily, member 5
IDBP-179979
immunoglobulin superfamily, member 5
IDBP-253125
immunoglobulin superfamily, member 5
IDBP-253127
immunoglobulin superfamily, member 5
IDBP-534635
immunoglobulin superfamily, member 5
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000183067:
Gene Information
Type Protein coding
Genomic Location Chromosome 16:96361668-96525580
Strand Forward strand
Band C4
Transcripts
ENSMUST00000081093 ENSMUSP00000079874
ENSMUST00000000163 ENSMUSP00000000163
ENSMUST00000113795 ENSMUSP00000109426
ENSMUST00000113794 ENSMUSP00000109425
ENSMUST00000139595
ENSMUST00000136292 ENSMUSP00000117904
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 7 experimentally validated interaction(s) in this database.
They are also associated with 1 interaction(s) predicted by orthology.
Experimentally validated
Total 7 [view]
Protein-Protein 7 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 1 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0005515 protein binding
GO:0030165 PDZ domain binding
Biological Process
GO:0016337 single organismal cell-cell adhesion
Cellular Component
GO:0005886 plasma membrane
GO:0005923 tight junction
GO:0009986 cell surface
GO:0016021 integral component of membrane
Orthologs
Species
Homo sapiens
Bos taurus
Gene ID
Gene Order
ENSG00000183067
View Gene Order
ENSBTAG00000002029
Not yet available
Pathways
NETPATH
REACTOME
KEGG
mmu04530
Tight junction pathway
INOH
PID NCI
Pathway Predictions based on Human Orthology Data
NETPATH
REACTOME
KEGG
hsa05120
Epithelial cell signaling in Helicobacter pylori infection pathway
hsa04530
Tight junction pathway
INOH
PID NCI
Cross-References
SwissProt
TrEMBL F7ATS8
UniProt Splice Variant
Entrez Gene 72058
UniGene Mm.119714
RefSeq NM_001177886 NM_001177887 NM_028078 XM_006523094
OMIM
CCDS CCDS28357 CCDS49924 CCDS49925
HPRD
IMGT
MGI ID MGI:1919308
MGI Symbol Igsf5
EMBL AC154258 AC154387
GenPept
RNA Seq Atlas 72058

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca