Version 5.4
| Mus musculus Gene: Col9a2 | |||||||
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| Summary | |||||||
| InnateDB Gene | IDBG-184212.6 | ||||||
| Last Modified | 2014-10-13 [Report errors or provide feedback] | ||||||
| Gene Symbol | Col9a2 | ||||||
| Gene Name | collagen, type IX, alpha 2 | ||||||
| Synonyms | AI427499; Col9a-2 | ||||||
| Species | Mus musculus | ||||||
| Ensembl Gene | ENSMUSG00000028626 | ||||||
| Encoded Proteins |
collagen, type IX, alpha 2
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| Protein Structure | |||||||
| Useful resources | Stemformatics EHFPI ImmGen | ||||||
| Entrez Gene | |||||||
| Summary |
This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000049089:
This gene encodes one of the three alpha chains of type IX collagen, the major collagen component of hyaline cartilage. Type IX collagen, a heterotrimeric molecule, is usually found in tissues containing type II collagen, a fibrillar collagen. This chain is unusual in that, unlike the other two type IX alpha chains, it contains a covalently attached glycosaminoglycan side chain. Mutations in this gene are associated with multiple epiphyseal dysplasia. [provided by RefSeq, Jul 2008] |
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| Gene Information | |||||||
| Type | Protein coding | ||||||
| Genomic Location | Chromosome 4:121039385-121055322 | ||||||
| Strand | Forward strand | ||||||
| Band | D2.2 | ||||||
| Transcripts |
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| Interactions | |||||||
| Number of Interactions |
This gene and/or its encoded proteins are associated with 0 experimentally validated interaction(s) in this database.
They are also associated with 4 interaction(s) predicted by orthology.
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| Gene Ontology | |||||||
Molecular Function |
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| Biological Process |
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| Cellular Component |
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| Orthologs | |||||||
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Species
Homo sapiens
Bos taurus
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Gene ID
Gene Order
Not yet available
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| Pathways | |||||||
| NETPATH | |||||||
| REACTOME | |||||||
| KEGG |
Protein digestion and absorption pathway
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| INOH | |||||||
| PID NCI | |||||||
| Pathway Predictions based on Human Orthology Data | |||||||
| NETPATH | |||||||
| REACTOME |
Integrin cell surface interactions pathway
Signaling by PDGF pathway
Collagen biosynthesis and modifying enzymes pathway
Collagen degradation pathway
NCAM1 interactions pathway
NCAM signaling for neurite out-growth pathway
Developmental Biology pathway
Extracellular matrix organization pathway
Degradation of the extracellular matrix pathway
Axon guidance pathway
Signal Transduction pathway
ECM proteoglycans pathway
Collagen formation pathway
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| KEGG |
Protein digestion and absorption pathway
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| INOH |
Integrin signaling pathway pathway
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| PID NCI | |||||||
| Cross-References | |||||||
| SwissProt | |||||||
| TrEMBL | I7HJR1 | ||||||
| UniProt Splice Variant | |||||||
| Entrez Gene | 12840 | ||||||
| UniGene | Mm.269384 | ||||||
| RefSeq | NM_007741 | ||||||
| OMIM | |||||||
| CCDS | CCDS18599 | ||||||
| HPRD | |||||||
| IMGT | |||||||
| MGI ID | MGI:88466 | ||||||
| MGI Symbol | Col9a2 | ||||||
| EMBL | AL669949 | ||||||
| GenPept | |||||||
| RNA Seq Atlas | 12840 | ||||||