Version 5.4
Mus musculus Gene: Cdh7
Summary
InnateDB Gene IDBG-186548.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Cdh7
Gene Name cadherin 7, type 2
Synonyms
Species Mus musculus
Ensembl Gene ENSMUSG00000026312
Encoded Proteins
IDBP-186554
cadherin 7, type 2
IDBP-255466
cadherin 7, type 2
IDBP-790403
cadherin 7, type 2
IDBP-790404
cadherin 7, type 2
IDBP-532609
cadherin 7, type 2
IDBP-716810
IDBP-790405
cadherin 7, type 2
IDBP-532986
cadherin 7, type 2
IDBP-624110
cadherin 7, type 2
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000081138:
This gene is a type II classical cadherin from the cadherin superfamily. The encoded membrane protein is a calcium dependent cell-cell adhesion glycoprotein comprised of five extracellular cadherin repeats, a transmembrane region and a highly conserved cytoplasmic tail. Type II (atypical) cadherins are defined based on their lack of a HAV cell adhesion recognition sequence specific to type I cadherins. Cadherins mediate cell-cell binding in a homophilic manner, contributing to the sorting of heterogeneous cell types and the maintenance of orderly structures. Alternative splicing in the 5' UTR of this gene yields variant transcripts encoding the same protein. [provided by RefSeq, Jul 2008]
This gene is a type II classical cadherin from the cadherin superfamily. The encoded membrane protein is a calcium dependent cell-cell adhesion glycoprotein comprised of five extracellular cadherin repeats, a transmembrane region and a highly conserved cytoplasmic tail. Type II (atypical) cadherins are defined based on their lack of a HAV cell adhesion recognition sequence specific to type I cadherins. Cadherins mediate cell-cell binding in a homophilic manner, contributing to the sorting of heterogeneous cell types and the maintenance of orderly structures. Alternative splicing in the 5\' UTR of this gene yields variant transcripts encoding the same protein. [provided by RefSeq, Jul 2008]
Gene Information
Type Protein coding
Genomic Location Chromosome 1:109982431-110140157
Strand Forward strand
Band E2.1
Transcripts
ENSMUST00000027542 ENSMUSP00000027542
ENSMUST00000112701 ENSMUSP00000108321
ENSMUST00000137092 ENSMUSP00000139465
ENSMUST00000129923 ENSMUSP00000140966
ENSMUST00000145188 ENSMUSP00000120231
ENSMUST00000131464 ENSMUSP00000138046
ENSMUST00000146282 ENSMUSP00000140650
ENSMUST00000134301 ENSMUSP00000123394
ENSMUST00000172005 ENSMUSP00000129715
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 0 experimentally validated interaction(s) in this database.
They are also associated with 2 interaction(s) predicted by orthology.
Predicted by orthology
Total 2 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0005509 calcium ion binding
Biological Process
GO:0007156 homophilic cell adhesion
Cellular Component
GO:0005886 plasma membrane
GO:0016020 membrane
GO:0016021 integral component of membrane
Orthologs
Species
Homo sapiens
Bos taurus
Gene ID
Gene Order
ENSG00000081138
View Gene Order
ENSBTAG00000014488
Not yet available
Pathways
NETPATH
REACTOME
REACT_248094
Cell-cell junction organization pathway
REACT_230395
Adherens junctions interactions pathway
REACT_241978
Cell junction organization pathway
REACT_223082
Cell-Cell communication pathway
KEGG
INOH
PID NCI
Pathway Predictions based on Human Orthology Data
NETPATH
REACTOME
REACT_19195
Adherens junctions interactions pathway
REACT_111155
Cell-Cell communication pathway
REACT_20676
Cell junction organization pathway
REACT_19331
Cell-cell junction organization pathway
KEGG
INOH
PID NCI
Cross-References
SwissProt
TrEMBL
UniProt Splice Variant
Entrez Gene
UniGene Mm.213407 Mm.407711 Mm.487119
RefSeq NM_172853 XM_006529600 XM_006529601 XM_006529602 XM_006529603 XM_006529604 XM_006529605 XM_006529606 XM_006529607 XM_006529608 XM_006529609 XM_006529610 XM_006529611
OMIM
CCDS CCDS15221
HPRD
IMGT
MGI ID
MGI Symbol
EMBL
GenPept
RNA Seq Atlas

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca