Version 5.4
Mus musculus Gene: Iffo1
Summary
InnateDB Gene IDBG-189359.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Iffo1
Gene Name intermediate filament family orphan 1
Synonyms
Species Mus musculus
Ensembl Gene ENSMUSG00000038271
Encoded Proteins
IDBP-189361
intermediate filament family orphan 1
IDBP-189363
intermediate filament family orphan 1
IDBP-400515
intermediate filament family orphan 1
IDBP-400512
intermediate filament family orphan 1
IDBP-539225
intermediate filament family orphan 1
IDBP-531788
intermediate filament family orphan 1
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000010295:
This gene is a member of the intermediate filament family. Intermediate filaments are proteins which are primordial components of the cytoskeleton and nuclear envelope. The proteins encoded by the members of this gene family are evolutionarily and structurally related but have limited sequence homology, with the exception of the central rod domain. Multiple alternatively spliced transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Jul 2010]
Gene Information
Type Protein coding
Genomic Location Chromosome 6:125145241-125161782
Strand Forward strand
Band F2
Transcripts
ENSMUST00000051171 ENSMUSP00000056373
ENSMUST00000088276 ENSMUSP00000085614
ENSMUST00000119527 ENSMUSP00000113376
ENSMUST00000117675 ENSMUSP00000113088
ENSMUST00000144364 ENSMUSP00000116701
ENSMUST00000139071
ENSMUST00000141230
ENSMUST00000148835 ENSMUSP00000115080
ENSMUST00000135559
ENSMUST00000150417
ENSMUST00000153006
ENSMUST00000150474
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 1 experimentally validated interaction(s) in this database.
They are also associated with 6 interaction(s) predicted by orthology.
Experimentally validated
Total 1 [view]
Protein-Protein 1 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 6 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0003674 molecular_function
Biological Process
GO:0008150 biological_process
Cellular Component
GO:0005575 cellular_component
Orthologs
Species
Homo sapiens
Bos taurus
Gene ID
Gene Order
ENSG00000010295
View Gene Order
ENSBTAG00000030369
Not yet available
Cross-References
SwissProt
TrEMBL
UniProt Splice Variant
Entrez Gene
UniGene Mm.129415 Mm.411685
RefSeq NM_001039669 NM_178787 XM_006506274 XM_006506276 XM_006506277 XM_006506278 XM_006506283
OMIM
CCDS CCDS39634 CCDS39635
HPRD
IMGT
MGI ID
MGI Symbol
EMBL
GenPept
RNA Seq Atlas

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca