Version 5.4
Mus musculus Gene: Hpca
Summary
InnateDB Gene IDBG-190496.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Hpca
Gene Name hippocalcin
Synonyms
Species Mus musculus
Ensembl Gene ENSMUSG00000028785
Encoded Proteins
IDBP-130789
hippocalcin
IDBP-190498
hippocalcin
IDBP-274114
hippocalcin
IDBP-274120
hippocalcin
IDBP-534903
hippocalcin
IDBP-534143
hippocalcin
IDBP-536857
hippocalcin
IDBP-534506
hippocalcin
IDBP-625542
hippocalcin
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000121905:
The protein encoded by this gene is a member of neuron-specific calcium-binding proteins family found in the retina and brain. This protein is associated with the plasma membrane. It has similarities to proteins located in the photoreceptor cells that regulate photosignal transduction in a calcium-sensitive manner. This protein displays recoverin activity and a calcium-dependent inhibition of rhodopsin kinase. It is identical to the rat and mouse hippocalcin proteins and thought to play an important role in neurons of the central nervous system in a number of species. [provided by RefSeq, Jul 2008]
Gene Information
Type Protein coding
Genomic Location Chromosome 4:129111570-129122036
Strand Reverse strand
Band D2.2
Transcripts
ENSMUST00000095807 ENSMUSP00000093486
ENSMUST00000030572 ENSMUSP00000030572
ENSMUST00000116444 ENSMUSP00000112145
ENSMUST00000116442 ENSMUSP00000112143
ENSMUST00000139450 ENSMUSP00000119178
ENSMUST00000125931 ENSMUSP00000115031
ENSMUST00000149763 ENSMUSP00000115619
ENSMUST00000135763 ENSMUSP00000120655
ENSMUST00000164649 ENSMUSP00000129548
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 1 experimentally validated interaction(s) in this database.
They are also associated with 2 interaction(s) predicted by orthology.
Experimentally validated
Total 1 [view]
Protein-Protein 1 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 2 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0003779 actin binding
GO:0005509 calcium ion binding
GO:0005515 protein binding
Biological Process
GO:0048839 inner ear development
Cellular Component
Orthologs
Species
Homo sapiens
Bos taurus
Gene ID
Gene Order
ENSG00000121905
View Gene Order
ENSBTAG00000008336
Not yet available
Cross-References
SwissProt
TrEMBL
UniProt Splice Variant
Entrez Gene
UniGene Mm.384452 Mm.483357
RefSeq NM_001130419 NM_001286081 NM_001286083 NM_010471 XM_006502774 XM_006502775 XM_006502776 XM_006536949 XM_006536950
OMIM
CCDS CCDS18682
HPRD
IMGT
MGI ID
MGI Symbol
EMBL
GenPept
RNA Seq Atlas

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca