Version 5.4
Mus musculus Gene: 5430435G22Rik
Summary
InnateDB Gene IDBG-191376.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol 5430435G22Rik
Gene Name RIKEN cDNA 5430435G22 gene
Synonyms
Species Mus musculus
Ensembl Gene ENSMUSG00000052688
Encoded Proteins
IDBP-191378
RIKEN cDNA 5430435G22 gene
IDBP-191380
RIKEN cDNA 5430435G22 gene
IDBP-539837
RIKEN cDNA 5430435G22 gene
IDBP-533100
RIKEN cDNA 5430435G22 gene
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary Currently no Entrez Summary Available. You might want to check the Summary Sections of the Orthologs.
Gene Information
Type Protein coding
Genomic Location Chromosome 1:131688695-131715439
Strand Forward strand
Band E4
Transcripts
ENSMUST00000064679 ENSMUSP00000065456
ENSMUST00000064664 ENSMUSP00000066452
ENSMUST00000136247 ENSMUSP00000123359
ENSMUST00000129905 ENSMUSP00000116515
ENSMUST00000130848
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 1 experimentally validated interaction(s) in this database.
Experimentally validated
Total 1 [view]
Protein-Protein 1 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Gene Ontology

Molecular Function
Accession GO Term
GO:0003924 GTPase activity
GO:0005525 GTP binding
Biological Process
GO:0006184 GTP catabolic process
GO:0006886 intracellular protein transport
GO:0006913 nucleocytoplasmic transport
GO:0007165 signal transduction
GO:0007264 small GTPase mediated signal transduction
GO:0015031 protein transport
GO:0032755 positive regulation of interleukin-6 production
GO:0034144 negative regulation of toll-like receptor 4 signaling pathway
GO:0034164 negative regulation of toll-like receptor 9 signaling pathway
GO:0034499 late endosome to Golgi transport
GO:0045654 positive regulation of megakaryocyte differentiation
GO:0051092 positive regulation of NF-kappaB transcription factor activity
Cellular Component
GO:0005622 intracellular
GO:0005634 nucleus
GO:0005737 cytoplasm
GO:0005764 lysosome
GO:0005770 late endosome
GO:0005794 Golgi apparatus
GO:0005802 trans-Golgi network
GO:0016020 membrane
GO:0030670 phagocytic vesicle membrane
GO:0045335 phagocytic vesicle
Orthologs
No orthologs found for this gene
Pathways
NETPATH
REACTOME
KEGG
mmu05146
Amoebiasis pathway
mmu04145
Phagosome pathway
INOH
PID NCI
Cross-References
SwissProt Q8VEA8
TrEMBL
UniProt Splice Variant
Entrez Gene 226421
UniGene Mm.396934
RefSeq NM_145509 XM_006529428 XM_006529430 XM_006529433
OMIM
CCDS CCDS15272
HPRD
IMGT
MGI ID MGI:2442295
MGI Symbol 5430435G22Rik
EMBL AB232641 AK030688 AK036056 AK079999 CH466520
GenPept BAC27078 BAC29291 BAC37802 BAF02903 EDL39704
RNA Seq Atlas 226421

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca