Version 5.4
Mus musculus Gene: Syt13
Summary
InnateDB Gene IDBG-192378.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Syt13
Gene Name synaptotagmin XIII
Synonyms 5730409J20Rik; AI549909; mKIAA1427
Species Mus musculus
Ensembl Gene ENSMUSG00000027220
Encoded Proteins
IDBP-192380
synaptotagmin XIII
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000019505:
This gene encodes a member of the large synaptotagmin protein family. Family members have an extracellular N-terminal transmembrane domain and a cytoplasmic C terminus with two tandem C2 domains (C2A and C2B). Synaptotogmin family members can form homo- and heteromeric complexes with each other. They also have different biochemical properties and developmental profiles, and patterns of tissue distribution. Synaptotagmins function as membrane traffickers in multicellular organisms. Two alternatively spliced transcript variants that encode different protein isoforms have been described for this gene. [provided by RefSeq, Oct 2011]
Gene Information
Type Protein coding
Genomic Location Chromosome 2:92915098-92956058
Strand Forward strand
Band E1
Transcripts
ENSMUST00000028648 ENSMUSP00000028648
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 2 experimentally validated interaction(s) in this database.
They are also associated with 1 interaction(s) predicted by orthology.
Experimentally validated
Total 2 [view]
Protein-Protein 1 [view]
Protein-DNA 1 [view]
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 1 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0003674 molecular_function
GO:0005515 protein binding
Biological Process
GO:0016192 vesicle-mediated transport
Cellular Component
GO:0005887 integral component of plasma membrane
GO:0030133 transport vesicle
GO:0030659 cytoplasmic vesicle membrane
Orthologs
Species
Homo sapiens
Bos taurus
Gene ID
Gene Order
ENSG00000019505
View Gene Order
ENSBTAG00000001703
Not yet available
Cross-References
SwissProt Q9EQT6
TrEMBL
UniProt Splice Variant
Entrez Gene 80976
UniGene Mm.396737 Mm.396881
RefSeq NM_030725
OMIM
CCDS CCDS16451
HPRD
IMGT
MGI ID MGI:1933945
MGI Symbol Syt13
EMBL AB048947 AK044038 AK049840 AK082425 AK129357 BC030907
GenPept AAH30907 BAB19628 BAC31748 BAC33948 BAC38491 BAC98167
RNA Seq Atlas 80976

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca