Version 5.4
Mus musculus Gene: Safb2
Summary
InnateDB Gene IDBG-192431.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Safb2
Gene Name scaffold attachment factor B2
Synonyms
Species Mus musculus
Ensembl Gene ENSMUSG00000042625
Encoded Proteins
IDBP-192433
scaffold attachment factor B2
IDBP-540115
scaffold attachment factor B2
IDBP-531861
scaffold attachment factor B2
IDBP-537331
scaffold attachment factor B2
IDBP-538717
scaffold attachment factor B2
IDBP-535262
scaffold attachment factor B2
IDBP-541749
scaffold attachment factor B2
IDBP-535914
scaffold attachment factor B2
IDBP-541814
scaffold attachment factor B2
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000130254:
Gene Information
Type Protein coding
Genomic Location Chromosome 17:56560965-56584585
Strand Reverse strand
Band D
Transcripts
ENSMUST00000075510 ENSMUSP00000074953
ENSMUST00000142752 ENSMUSP00000119141
ENSMUST00000124111 ENSMUSP00000120845
ENSMUST00000144255 ENSMUSP00000123673
ENSMUST00000142940 ENSMUSP00000123229
ENSMUST00000156640
ENSMUST00000154991 ENSMUSP00000117696
ENSMUST00000131056 ENSMUSP00000120750
ENSMUST00000127947
ENSMUST00000124457
ENSMUST00000133604 ENSMUSP00000119324
ENSMUST00000134741
ENSMUST00000134497
ENSMUST00000155983 ENSMUSP00000116363
ENSMUST00000140037
ENSMUST00000146958
ENSMUST00000146070
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 9 experimentally validated interaction(s) in this database.
They are also associated with 26 interaction(s) predicted by orthology.
Experimentally validated
Total 9 [view]
Protein-Protein 9 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 26 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0000166 nucleotide binding
GO:0003676 nucleic acid binding
GO:0003677 DNA binding
GO:0003723 RNA binding
GO:0005515 protein binding
GO:0042802 identical protein binding
GO:0044822 poly(A) RNA binding
Biological Process
GO:0006351 transcription, DNA-templated
GO:0006355 regulation of transcription, DNA-templated
GO:0008150 biological_process
Cellular Component
GO:0005634 nucleus
GO:0005737 cytoplasm
GO:0043231 intracellular membrane-bounded organelle
Orthologs
Species
Homo sapiens
Bos taurus
Gene ID
Gene Order
ENSG00000130254
View Gene Order
ENSBTAG00000001790
Not yet available
Cross-References
SwissProt
TrEMBL
UniProt Splice Variant
Entrez Gene
UniGene Mm.408350 Mm.482517
RefSeq NM_001029979 XM_006524156 XM_006524157 XM_006524158 XM_006524159
OMIM
CCDS CCDS28907
HPRD
IMGT
MGI ID
MGI Symbol
EMBL
GenPept
RNA Seq Atlas

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca