Version 5.4
| Mus musculus Gene: Optc | |||||||||||
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| Summary | |||||||||||
| InnateDB Gene | IDBG-193195.6 | ||||||||||
| Last Modified | 2014-10-13 [Report errors or provide feedback] | ||||||||||
| Gene Symbol | Optc | ||||||||||
| Gene Name | opticin | ||||||||||
| Synonyms | |||||||||||
| Species | Mus musculus | ||||||||||
| Ensembl Gene | ENSMUSG00000010311 | ||||||||||
| Encoded Proteins |
opticin
opticin
opticin
opticin
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| Protein Structure | |||||||||||
| Useful resources | Stemformatics EHFPI ImmGen | ||||||||||
| Entrez Gene | |||||||||||
| Summary |
This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000188770:
Opticin belongs to class III of the small leucine-rich repeat protein (SLRP) family. Members of this family are typically associated with the extracellular matrix. Opticin is present in significant quantities in the vitreous of the eye and also localizes to the cornea, iris, ciliary body, optic nerve, choroid, retina, and fetal liver. Opticin may noncovalently bind collagen fibrils and regulate fibril morphology, spacing, and organization. The opticin gene is mapped to a region of chromosome 1 that is associated with the inherited eye diseases age-related macular degeneration (AMD) and posterior column ataxia with retinosa pigmentosa (AXPC1). [provided by RefSeq, Jul 2008] |
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| Gene Information | |||||||||||
| Type | Protein coding | ||||||||||
| Genomic Location | Chromosome 1:133897199-133907999 | ||||||||||
| Strand | Reverse strand | ||||||||||
| Band | E4 | ||||||||||
| Transcripts |
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| Interactions | |||||||||||
| Number of Interactions |
This gene and/or its encoded proteins are associated with 0 experimentally validated interaction(s) in this database.
They are also associated with 1 interaction(s) predicted by orthology.
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| Gene Ontology | |||||||||||
Molecular Function |
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| Biological Process |
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| Cellular Component |
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| Orthologs | |||||||||||
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Species
Homo sapiens
Bos taurus
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Gene ID
Gene Order
Not yet available
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| Cross-References | |||||||||||
| SwissProt | |||||||||||
| TrEMBL | E9PUR1 Q3U5A9 | ||||||||||
| UniProt Splice Variant | |||||||||||
| Entrez Gene | 269120 | ||||||||||
| UniGene | Mm.59985 | ||||||||||
| RefSeq | NM_001160421 NM_001160420 NM_001160422 NM_054076 XM_006529660 XM_006529661 XM_006529662 XM_006529663 | ||||||||||
| OMIM | |||||||||||
| CCDS | CCDS48366 CCDS15299 | ||||||||||
| HPRD | |||||||||||
| IMGT | |||||||||||
| MGI ID | MGI:2151113 | ||||||||||
| MGI Symbol | Optc | ||||||||||
| EMBL | AC131998 AC157924 AK153750 FQ976559 | ||||||||||
| GenPept | BAE32170 | ||||||||||
| RNA Seq Atlas | 269120 | ||||||||||