Version 5.4
Mus musculus Gene: Srrm4
Summary
InnateDB Gene IDBG-194646.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Srrm4
Gene Name serine/arginine repetitive matrix 4
Synonyms 1500001A10Rik; B230202K19Rik; bv; mKIAA1853; nSR100
Species Mus musculus
Ensembl Gene ENSMUSG00000063919
Encoded Proteins
IDBP-194648
serine/arginine repetitive matrix 4
IDBP-541291
serine/arginine repetitive matrix 4
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000139767:
SRRM4 promotes alternative splicing and inclusion of neural-specific exons in target mRNAs (Calarco et al., 2009 [PubMed 19737518]).[supplied by OMIM, Oct 2009]
Gene Information
Type Protein coding
Genomic Location Chromosome 5:116439272-116591817
Strand Reverse strand
Band F
Transcripts
ENSMUST00000076124 ENSMUSP00000075488
ENSMUST00000122954 ENSMUSP00000120474
ENSMUST00000150127
ENSMUST00000139425
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 1 experimentally validated interaction(s) in this database.
They are also associated with 1 interaction(s) predicted by orthology.
Experimentally validated
Total 1 [view]
Protein-Protein 0
Protein-DNA 0
Protein-RNA 1 [view]
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 1 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0003729 mRNA binding
Biological Process
GO:0000381 regulation of alternative mRNA splicing, via spliceosome
GO:0006397 mRNA processing
GO:0007399 nervous system development
GO:0007605 sensory perception of sound
GO:0008380 RNA splicing
GO:0030154 cell differentiation
GO:0043484 regulation of RNA splicing
Cellular Component
GO:0005634 nucleus
Orthologs
Species
Homo sapiens
Bos taurus
Gene ID
Gene Order
ENSG00000139767
View Gene Order
ENSBTAG00000008676
Not yet available
Cross-References
SwissProt
TrEMBL
UniProt Splice Variant
Entrez Gene
UniGene Mm.146779
RefSeq NM_026886 XM_006530456
OMIM
CCDS CCDS19601
HPRD
IMGT
MGI ID
MGI Symbol
EMBL
GenPept
RNA Seq Atlas

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca