Version 5.4
Mus musculus Gene: Alyref2
Summary
InnateDB Gene IDBG-204647.7
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Alyref2
Gene Name Aly/REF export factor 2
Synonyms C130042O11Rik; REF2; Refbp2
Species Mus musculus
Ensembl Gene ENSMUSG00000060244
Encoded Proteins
IDBP-204649
RNA and export factor binding protein 2
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary Currently no Entrez Summary Available. You might want to check the Summary Sections of the Orthologs.
Gene Information
Type Protein coding
Genomic Location Chromosome 1:171503478-171504750
Strand Forward strand
Band H3
Transcripts
ENSMUST00000081527 ENSMUSP00000080242
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 1 experimentally validated interaction(s) in this database.
Experimentally validated
Total 1 [view]
Protein-Protein 1 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Gene Ontology

Molecular Function
Accession GO Term
GO:0000166 nucleotide binding
GO:0003676 nucleic acid binding
GO:0003697 single-stranded DNA binding
GO:0003723 RNA binding
Biological Process
Cellular Component
GO:0005575 cellular_component
Orthologs
No orthologs found for this gene
Pathways
NETPATH
REACTOME
KEGG
mmu03040
Spliceosome pathway
mmu03013
RNA transport pathway
mmu03015
mRNA surveillance pathway pathway
INOH
PID NCI
Cross-References
SwissProt
TrEMBL G3X9I4
UniProt Splice Variant
Entrez Gene 56009
UniGene
RefSeq NM_019484
OMIM
CCDS CCDS15497
HPRD
IMGT
MGI ID MGI:1913144
MGI Symbol Alyref2
EMBL AC083892 CH466520
GenPept EDL39077
RNA Seq Atlas 56009

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca