Mus musculus Gene: H3f3a
Summary
InnateDB Gene IDBG-207281.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol H3f3a
Gene Name H3 histone, family 3A
Synonyms
Species Mus musculus
Ensembl Gene ENSMUSG00000060743
Encoded Proteins
H3 histone, family 3A
H3 histone, family 3A
H3 histone, family 3A
H3 histone, family 3A
H3 histone, family 3A
H3 histone, family 3A
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary Currently no Entrez Summary Available. You might want to check the Summary Sections of the Orthologs.
Gene Information
Type Protein coding
Genomic Location Chromosome 1:180800832-180813943
Strand Reverse strand
Band H4
Transcripts
ENSMUST00000081026 ENSMUSP00000079816
ENSMUST00000161308 ENSMUSP00000124509
ENSMUST00000162814 ENSMUSP00000125104
ENSMUST00000159789 ENSMUSP00000125754
ENSMUST00000159441
ENSMUST00000162118 ENSMUSP00000123946
ENSMUST00000159685 ENSMUSP00000124040
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 52 experimentally validated interaction(s) in this database.
Experimentally validated
Total 52 [view]
Protein-Protein 35 [view]
Protein-DNA 17 [view]
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Gene Ontology

Molecular Function
Accession GO Term
GO:0003677 DNA binding
GO:0046982 protein heterodimerization activity
Biological Process
GO:0006334 nucleosome assembly
GO:0007420 brain development
GO:0009725 response to hormone
Cellular Component
GO:0000786 nucleosome
GO:0005634 nucleus
GO:0005654 nucleoplasm
Orthologs
No orthologs found for this gene
Pathways
NETPATH
REACTOME
Meiotic Recombination pathway
Meiotic Synapsis pathway
RNA Polymerase I Transcription pathway
Oxidative Stress Induced Senescence pathway
RNA Polymerase I, RNA Polymerase III, and Mitochondrial Transcription pathway
Mus musculus biological processes pathway
Cell Cycle, Mitotic pathway
NoRC negatively regulates rRNA expression pathway
Chromatin organization pathway
Disease pathway
Hemostasis pathway
Signaling by Wnt pathway
Signaling by WNT in cancer pathway
Cellular responses to stress pathway
Amyloids pathway
HATs acetylate histones pathway
RNA Polymerase I Promoter Opening pathway
PRC2 methylates histones and DNA pathway
Meiotic synapsis pathway
Cell Cycle pathway
NoRC negatively regulates rRNA expression pathway
M Phase pathway
Condensation of Prophase Chromosomes pathway
Chromatin modifying enzymes pathway
formation of the beta-catenin:TCF transactivating complex pathway
Cellular Senescence pathway
Factors involved in megakaryocyte development and platelet production pathway
misspliced LRP5 mutants have enhanced beta-catenin-dependent signaling pathway
RNF mutants show enhanced WNT signaling and proliferation pathway
Epigenetic regulation of gene expression pathway
Transcriptional regulation by small RNAs pathway
TCF dependent signaling in response to WNT pathway
SIRT1 negatively regulates rRNA Expression pathway
Senescence-Associated Secretory Phenotype (SASP) pathway
Gene Expression pathway
DNA methylation pathway
Negative epigenetic regulation of rRNA expression pathway
Regulatory RNA pathways pathway
Mitotic Prophase pathway
Signal Transduction pathway
Meiosis pathway
Meiotic recombination pathway
RNA Polymerase I Promoter Clearance pathway
RNA Polymerase I Chain Elongation pathway
XAV939 inhibits tankyrase, stabilizing AXIN pathway
KEGG
Systemic lupus erythematosus pathway
INOH
PID NCI
Cross-References
SwissProt
TrEMBL E0CYN1
UniProt Splice Variant
Entrez Gene 667250
UniGene Mm.371797 Mm.375617 Mm.385440 Mm.427935 Mm.454661 Mm.488823
RefSeq NM_001081019 NM_008210 XM_003084942 XM_006543112 XM_006543683 XM_006544749 XM_889893 XM_890719
OMIM
CCDS CCDS15573
HPRD
IMGT
MGI ID MGI:1097686
MGI Symbol H3f3a
EMBL AC121292
GenPept
RNA Seq Atlas 102642045 15078 15081 544973 625328 667250