Version 5.4
Mus musculus Gene: Sdcbp2
Summary
InnateDB Gene IDBG-209523.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Sdcbp2
Gene Name syndecan binding protein (syntenin) 2
Synonyms
Species Mus musculus
Ensembl Gene ENSMUSG00000027456
Encoded Proteins
IDBP-209525
syndecan binding protein (syntenin) 2
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000125775:
The protein encoded by this gene contains two class II PDZ domains. PDZ domains facilitate protein-protein interactions by binding to the cytoplasmic C-terminus of transmembrane proteins, and PDZ-containing proteins mediate cell signaling and the organization of protein complexes. The encoded protein binds to phosphatidylinositol 4, 5-bisphosphate (PIP2) and plays a role in nuclear PIP2 organization and cell division. Alternatively spliced transcript variants encoding multiple isoforms have been observed for this gene. Read-through transcription also exists between this gene and the upstream FKBP1A (FK506 binding protein 1A, 12kDa) gene, as represented in GeneID:100528031. [provided by RefSeq, Sep 2011]
Gene Information
Type Protein coding
Genomic Location Chromosome 2:151572622-151590005
Strand Forward strand
Band G3
Transcripts
ENSMUST00000028950 ENSMUSP00000028950
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 0 experimentally validated interaction(s) in this database.
They are also associated with 10 interaction(s) predicted by orthology.
Predicted by orthology
Total 10 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0005515 protein binding
GO:0008022 protein C-terminus binding
GO:0042803 protein homodimerization activity
GO:0046982 protein heterodimerization activity
Biological Process
GO:0008150 biological_process
Cellular Component
GO:0005737 cytoplasm
GO:0070062 extracellular vesicular exosome
Orthologs
Species
Homo sapiens
Bos taurus
Gene ID
Gene Order
ENSG00000125775
View Gene Order
ENSBTAG00000021321
Not yet available
Cross-References
SwissProt Q99JZ0
TrEMBL Q3UN51
UniProt Splice Variant
Entrez Gene 228765
UniGene Mm.32068
RefSeq NM_145535 XM_006499304 XM_006499305
OMIM
CCDS CCDS16870
HPRD
IMGT
MGI ID MGI:2385156
MGI Symbol Sdcbp2
EMBL AK136572 AK144452 AK160483 BC005556
GenPept AAH05556 BAE23054 BAE25896 BAE35814
RNA Seq Atlas 228765

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca