Version 5.4
Mus musculus Gene: Atxn2l
Summary
InnateDB Gene IDBG-209553.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Atxn2l
Gene Name ataxin 2-like
Synonyms
Species Mus musculus
Ensembl Gene ENSMUSG00000032637
Encoded Proteins
IDBP-209555
ataxin 2-like
IDBP-622856
ataxin 2-like
IDBP-622859
ataxin 2-like
IDBP-722627
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000168488:
This gene encodes an ataxin type 2 related protein of unknown function. This protein is a member of the spinocerebellar ataxia (SCAs) family, which is associated with a complex group of neurodegenerative disorders. Several alternatively spliced transcripts encoding different isoforms have been found for this gene. [provided by RefSeq, Jul 2008]
Gene Information
Type Protein coding
Genomic Location Chromosome 7:126491708-126503437
Strand Reverse strand
Band F3
Transcripts
ENSMUST00000040202 ENSMUSP00000035415
ENSMUST00000167759 ENSMUSP00000132959
ENSMUST00000166682 ENSMUSP00000125881
ENSMUST00000179818 ENSMUSP00000137108
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 6 experimentally validated interaction(s) in this database.
They are also associated with 24 interaction(s) predicted by orthology.
Experimentally validated
Total 6 [view]
Protein-Protein 5 [view]
Protein-DNA 0
Protein-RNA 1 [view]
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 24 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0005515 protein binding
GO:0044822 poly(A) RNA binding
Biological Process
GO:0010603 regulation of cytoplasmic mRNA processing body assembly
GO:0034063 stress granule assembly
Cellular Component
GO:0005737 cytoplasm
GO:0010494 cytoplasmic stress granule
GO:0016020 membrane
GO:0016607 nuclear speck
Orthologs
Species
Homo sapiens
Bos taurus
Gene ID
Gene Order
ENSG00000168488
View Gene Order
ENSBTAG00000032087
Not yet available
Cross-References
SwissProt Q7TQH0
TrEMBL E9Q5Q0
UniProt Splice Variant
Entrez Gene 233871
UniGene Mm.231450 Mm.397595
RefSeq NM_183020 XM_006507725 XM_006507724 XM_006507726
OMIM
CCDS CCDS21831
HPRD
IMGT
MGI ID MGI:2446242
MGI Symbol Atxn2l
EMBL AC125322 BC034083 BC043451 BC054483
GenPept AAH34083 AAH43451 AAH54483
RNA Seq Atlas 233871

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca