Version 5.4
Mus musculus Gene: Phrf1
Summary
InnateDB Gene IDBG-212075.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Phrf1
Gene Name PHD and ring finger domains 1
Synonyms AA673488
Species Mus musculus
Ensembl Gene ENSMUSG00000038611
Encoded Proteins
IDBP-269620
PHD and ring finger domains 1
IDBP-400127
PHD and ring finger domains 1
IDBP-532041
PHD and ring finger domains 1
IDBP-533651
PHD and ring finger domains 1
IDBP-534776
PHD and ring finger domains 1
IDBP-542089
PHD and ring finger domains 1
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000070047:
Gene Information
Type Protein coding
Genomic Location Chromosome 7:141228784-141262750
Strand Forward strand
Band F5
Transcripts
ENSMUST00000106027 ENSMUSP00000101648
ENSMUST00000122143 ENSMUSP00000113195
ENSMUST00000155123 ENSMUSP00000120759
ENSMUST00000134057 ENSMUSP00000118425
ENSMUST00000132540
ENSMUST00000122868
ENSMUST00000144632
ENSMUST00000142572 ENSMUSP00000117393
ENSMUST00000130852
ENSMUST00000130687 ENSMUSP00000123351
ENSMUST00000144250
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 0 experimentally validated interaction(s) in this database.
They are also associated with 6 interaction(s) predicted by orthology.
Predicted by orthology
Total 6 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0005515 protein binding
GO:0008270 zinc ion binding
GO:0019904 protein domain specific binding
GO:0046872 metal ion binding
GO:0070063 RNA polymerase binding
Biological Process
GO:0006366 transcription from RNA polymerase II promoter
GO:0006397 mRNA processing
GO:0035556 intracellular signal transduction
Cellular Component
GO:0016020 membrane
Orthologs
Species
Homo sapiens
Bos taurus
Gene ID
Gene Order
ENSG00000070047
View Gene Order
ENSBTAG00000046359
Not yet available
Cross-References
SwissProt
TrEMBL
UniProt Splice Variant
Entrez Gene
UniGene Mm.248656
RefSeq NM_001081118 XM_006536139
OMIM
CCDS CCDS52441
HPRD
IMGT
MGI ID
MGI Symbol
EMBL
GenPept
RNA Seq Atlas

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca