Version 5.4
Mus musculus Gene: Sdk2
Summary
InnateDB Gene IDBG-214078.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Sdk2
Gene Name sidekick homolog 2 (chicken)
Synonyms
Species Mus musculus
Ensembl Gene ENSMUSG00000041592
Encoded Proteins
IDBP-214082
sidekick homolog 2 (chicken)
IDBP-532052
sidekick homolog 2 (chicken)
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000069188:
The protein encoded by this gene is a member of the immunoglobulin superfamily. The protein contains two immunoglobulin domains and thirteen fibronectin type III domains. Fibronectin type III domains are present in both extracellular and intracellular proteins and tandem repeats are known to contain binding sites for DNA, heparin and the cell surface. This protein, and a homologous mouse sequence, are very similar to the Drosophila sidekick gene product but the specific function of this superfamily member is not yet known. Evidence for alternative splicing at this gene locus has been observed but the full-length nature of additional variants has not yet been determined. [provided by RefSeq, Jul 2008]
Gene Information
Type Protein coding
Genomic Location Chromosome 11:113776374-114067046
Strand Reverse strand
Band E2
Transcripts
ENSMUST00000041627 ENSMUSP00000038972
ENSMUST00000156955
ENSMUST00000125879
ENSMUST00000141943 ENSMUSP00000116872
ENSMUST00000155651
ENSMUST00000144301
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 1 experimentally validated interaction(s) in this database.
They are also associated with 2 interaction(s) predicted by orthology.
Experimentally validated
Total 1 [view]
Protein-Protein 0
Protein-DNA 0
Protein-RNA 1 [view]
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 2 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0003674 molecular_function
GO:0005515 protein binding
Biological Process
GO:0007155 cell adhesion
Cellular Component
GO:0016021 integral component of membrane
Orthologs
Species
Homo sapiens
Bos taurus
Gene ID
Gene Order
ENSG00000069188
View Gene Order
ENSBTAG00000044195
Not yet available
Cross-References
SwissProt Q6V4S5
TrEMBL
UniProt Splice Variant
Entrez Gene 237979
UniGene Mm.130504 Mm.397633 Mm.401394
RefSeq NM_172800 XM_006533254 XM_006533255
OMIM
CCDS CCDS25605
HPRD
IMGT
MGI ID MGI:2443847
MGI Symbol Sdk2
EMBL AK129379 AK161326 AY351699 BC038036
GenPept AAH38036 AAQ57661 BAC98189 BAE36324
RNA Seq Atlas 237979

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca