Version 5.4
Mus musculus Gene: Ush1g
Summary
InnateDB Gene IDBG-214279.7
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Ush1g
Gene Name Usher syndrome 1G
Synonyms js; Sans
Species Mus musculus
Ensembl Gene ENSMUSG00000045288
Encoded Proteins
IDBP-214281
Usher syndrome 1G homolog (human)
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000182040:
This gene encodes a protein that contains three ankyrin domains, a class I PDZ-binding motif and a sterile alpha motif. The encoded protein interacts with harmonin, which is associated with Usher syndrome type 1C. This protein plays a role in the development and maintenance of the auditory and visual systems and functions in the cohesion of hair bundles formed by inner ear sensory cells. Mutations in this gene are associated with Usher syndrome type 1G (USH1G). [provided by RefSeq, Jul 2008]
Gene Information
Type Protein coding
Genomic Location Chromosome 11:115315192-115322041
Strand Reverse strand
Band E2
Transcripts
ENSMUST00000103037 ENSMUSP00000099326
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 4 experimentally validated interaction(s) in this database.
They are also associated with 1 interaction(s) predicted by orthology.
Experimentally validated
Total 4 [view]
Protein-Protein 4 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 1 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0005515 protein binding
GO:0030507 spectrin binding
GO:0042803 protein homodimerization activity
Biological Process
GO:0007605 sensory perception of sound
GO:0042472 inner ear morphogenesis
GO:0045494 photoreceptor cell maintenance
GO:0050953 sensory perception of light stimulus
GO:0050957 equilibrioception
GO:0060113 inner ear receptor cell differentiation
Cellular Component
GO:0005737 cytoplasm
GO:0005829 cytosol
GO:0005886 plasma membrane
GO:0015629 actin cytoskeleton
GO:0016020 membrane
Orthologs
Species
Homo sapiens
Bos taurus
Gene ID
Gene Order
ENSG00000182040
View Gene Order
ENSBTAG00000017252
Not yet available
Cross-References
SwissProt Q80T11
TrEMBL Q0VBT9
UniProt Splice Variant
Entrez Gene 16470
UniGene Mm.451539
RefSeq NM_176847 XM_006532313 XM_006532314
OMIM
CCDS CCDS25627
HPRD
IMGT
MGI ID MGI:2450757
MGI Symbol Ush1g
EMBL AB087501 AB087502 BC120509 BC137807
GenPept AAI20510 AAI37808 BAC57426 BAC57430
RNA Seq Atlas 16470

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca