Version 5.4
Homo sapiens Gene: CNOT10
Summary
InnateDB Gene IDBG-23799.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol CNOT10
Gene Name CCR4-NOT transcription complex, subunit 10
Synonyms
Species Homo sapiens
Ensembl Gene ENSG00000182973
Encoded Proteins
IDBP-23801
CCR4-NOT transcription complex, subunit 10
IDBP-23803
CCR4-NOT transcription complex, subunit 10
IDBP-369714
CCR4-NOT transcription complex, subunit 10
IDBP-369719
CCR4-NOT transcription complex, subunit 10
IDBP-369726
CCR4-NOT transcription complex, subunit 10
IDBP-369732
CCR4-NOT transcription complex, subunit 10
IDBP-369734
CCR4-NOT transcription complex, subunit 10
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary Currently no Entrez Summary Available. You might want to check the Summary Sections of the Orthologs.
Gene Information
Type Protein coding
Genomic Location Chromosome 3:32685145-32773875
Strand Forward strand
Band p22.3
Transcripts
ENST00000328834 ENSP00000330060
ENST00000331889 ENSP00000329376
ENST00000454516 ENSP00000399862
ENST00000435630 ENSP00000402795
ENST00000416457 ENSP00000402979
ENST00000455381 ENSP00000392312
ENST00000430408 ENSP00000395385
ENST00000494439
ENST00000463006
ENST00000485136
ENST00000466103
ENST00000463697
ENST00000471003
ENST00000481526
ENST00000479397
ENST00000468599
ENST00000473064
ENST00000476967
ENST00000556853
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 33 experimentally validated interaction(s) in this database.
Experimentally validated
Total 33 [view]
Protein-Protein 33 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Gene Ontology

Molecular Function
Accession GO Term
GO:0005515 protein binding
Biological Process
GO:0000288 nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay
GO:0000289 nuclear-transcribed mRNA poly(A) tail shortening
GO:0006351 transcription, DNA-templated
GO:0006355 regulation of transcription, DNA-templated
GO:0006417 regulation of translation
GO:0010467 gene expression
GO:0016070 RNA metabolic process
GO:0016071 mRNA metabolic process
GO:0031047 gene silencing by RNA
Cellular Component
GO:0005634 nucleus
GO:0005829 cytosol
GO:0016020 membrane
GO:0030014 CCR4-NOT complex
Orthologs
Species
Mus musculus
Bos taurus
Gene ID
Gene Order
ENSMUSG00000056167
View Gene Order
ENSBTAG00000004834
Not yet available
Pathways
NETPATH
REACTOME
REACT_20514
Deadenylation of mRNA pathway
REACT_20639
Deadenylation-dependent mRNA decay pathway
REACT_71
Gene Expression pathway
KEGG
hsa03018
RNA degradation pathway
INOH
PID NCI
Cross-References
SwissProt
TrEMBL
UniProt Splice Variant
Entrez Gene
UniGene Hs.444851
RefSeq NM_001256741 NM_001256742 NM_015442 XM_006713084
HUGO
OMIM
CCDS CCDS2655 CCDS58821 CCDS58822
HPRD 16731
IMGT
EMBL
GenPept
RNA Seq Atlas

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca