Version 5.4
Mus musculus Gene: Srp54b
Summary
InnateDB Gene IDBG-259690.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Srp54b
Gene Name signal recognition particle 54B
Synonyms 54kDa; Srp54
Species Mus musculus
Ensembl Gene ENSMUSG00000079108
Encoded Proteins
IDBP-259692
signal recognition particle 54B
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary Currently no Entrez Summary Available. You might want to check the Summary Sections of the Orthologs.
Gene Information
Type Protein coding
Genomic Location Chromosome 12:55155104-55263020
Strand Forward strand
Band C1
Transcripts
ENSMUST00000110708 ENSMUSP00000106336
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 1 experimentally validated interaction(s) in this database.
Experimentally validated
Total 1 [view]
Protein-Protein 1 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Gene Ontology

Molecular Function
Accession GO Term
GO:0000166 nucleotide binding
GO:0003674 molecular_function
GO:0003924 GTPase activity
GO:0005525 GTP binding
GO:0008312 7S RNA binding
GO:0017111 nucleoside-triphosphatase activity
Biological Process
GO:0006184 GTP catabolic process
GO:0006614 SRP-dependent cotranslational protein targeting to membrane
GO:0008150 biological_process
Cellular Component
GO:0005575 cellular_component
GO:0005786 signal recognition particle, endoplasmic reticulum targeting
GO:0016607 nuclear speck
GO:0048500 signal recognition particle
Orthologs
No orthologs found for this gene
Pathways
NETPATH
REACTOME
REACT_254308
Translation pathway
REACT_247926
Metabolism of proteins pathway
REACT_196445
SRP-dependent cotranslational protein targeting to membrane pathway
REACT_233572
Gene Expression pathway
KEGG
mmu03060
Protein export pathway
INOH
PID NCI
Cross-References
SwissProt
TrEMBL
UniProt Splice Variant
Entrez Gene
UniGene Mm.12848 Mm.451144 Mm.471968 Mm.482197
RefSeq NM_001100109 NM_001100110 XM_006515868 XM_006516155
OMIM
CCDS CCDS49065 CCDS49067
HPRD
IMGT
MGI ID
MGI Symbol
EMBL
GenPept
RNA Seq Atlas

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca