Version 5.4
Homo sapiens Gene: TM6SF1
Summary
InnateDB Gene IDBG-27012.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol TM6SF1
Gene Name transmembrane 6 superfamily member 1
Synonyms
Species Homo sapiens
Ensembl Gene ENSG00000136404
Encoded Proteins
IDBP-27014
transmembrane 6 superfamily member 1
IDBP-27016
transmembrane 6 superfamily member 1
IDBP-27020
transmembrane 6 superfamily member 1
IDBP-27022
transmembrane 6 superfamily member 1
IDBP-744887
IDBP-746505
IDBP-746527
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary Currently no Entrez Summary Available. You might want to check the Summary Sections of the Orthologs.
Gene Information
Type Protein coding
Genomic Location Chromosome 15:83107407-83144854
Strand Forward strand
Band q25.2
Transcripts
ENST00000379390 ENSP00000368700
ENST00000258909 ENSP00000258909
ENST00000322019 ENSP00000317000
ENST00000379384 ENSP00000368693
ENST00000565982 ENSP00000454275
ENST00000564988
ENST00000561551 ENSP00000454416
ENST00000565774 ENSP00000457477
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 1 experimentally validated interaction(s) in this database.
They are also associated with 1 interaction(s) predicted by orthology.
Experimentally validated
Total 1 [view]
Protein-Protein 0
Protein-DNA 1 [view]
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 1 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0003674 molecular_function
Biological Process
GO:0008150 biological_process
Cellular Component
GO:0016021 integral component of membrane
Orthologs
Species
Mus musculus
Bos taurus
Gene ID
Gene Order
ENSMUSG00000038623
View Gene Order
ENSBTAG00000012926
Not yet available
Cross-References
SwissProt
TrEMBL
UniProt Splice Variant
Entrez Gene 53346
UniGene Hs.513094 Hs.738075
RefSeq NM_001144903 NM_023003
HUGO HGNC:11860
OMIM 606562
CCDS CCDS10323 CCDS45338
HPRD 08411
IMGT
EMBL
GenPept
RNA Seq Atlas 53346

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca