Version 5.4
Mus musculus Gene: Raet1d
Summary
InnateDB Gene IDBG-270707.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Raet1d
Gene Name retinoic acid early transcript delta
Synonyms RAE-1alpha; RAE-1beta; RAE-1delta; Rae1alpha; Raet1
Species Mus musculus
Ensembl Gene ENSMUSG00000078452
Encoded Proteins
IDBP-137535
retinoic acid early transcript delta
IDBP-789823
retinoic acid early transcript delta
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
InnateDB Annotation
Summary
PMID 21411527
Raet1a expression on erythroblast surface is induced early after Friend virus inoculation, and is recognized by Klrk1 expressed on the NK cells to trigger cytotoxic activities.
Entrez Gene
Summary Currently no Entrez Summary Available. You might want to check the Summary Sections of the Orthologs.
Gene Information
Type Protein coding
Genomic Location Chromosome 10:22360552-22374139
Strand Forward strand
Band A3
Transcripts
ENSMUST00000095795 ENSMUSP00000093471
ENSMUST00000182677 ENSMUSP00000138328
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 1 experimentally validated interaction(s) in this database.
Experimentally validated
Total 1 [view]
Protein-Protein 1 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Gene Ontology

Molecular Function
Accession GO Term
GO:0003823 antigen binding
GO:0005515 protein binding
GO:0046703 natural killer cell lectin-like receptor binding
Biological Process
GO:0001913 T cell mediated cytotoxicity
GO:0019882 antigen processing and presentation
GO:0042267 natural killer cell mediated cytotoxicity
GO:0045087 innate immune response (InnateDB)
Cellular Component
GO:0009897 external side of plasma membrane
GO:0046658 anchored component of plasma membrane
Orthologs
No orthologs found for this gene
Pathways
NETPATH
REACTOME
KEGG
mmu04650
Natural killer cell mediated cytotoxicity pathway
INOH
PID NCI
Cross-References
SwissProt
TrEMBL
UniProt Splice Variant
Entrez Gene
UniGene
RefSeq NM_009016 NM_009017 NM_009018 NM_020030 XM_006512808
OMIM
CCDS CCDS35866
HPRD
IMGT
MGI ID
MGI Symbol
EMBL
GenPept
RNA Seq Atlas

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca