Version 5.4
Homo sapiens Gene: SEC22C
Summary
InnateDB Gene IDBG-27772.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol SEC22C
Gene Name SEC22 vesicle trafficking protein homolog C (S. cerevisiae)
Synonyms SEC22L3
Species Homo sapiens
Ensembl Gene ENSG00000093183
Encoded Proteins
IDBP-27774
SEC22 vesicle trafficking protein homolog C (S. cerevisiae)
IDBP-27776
SEC22 vesicle trafficking protein homolog C (S. cerevisiae)
IDBP-27778
SEC22 vesicle trafficking protein homolog C (S. cerevisiae)
IDBP-373436
SEC22 vesicle trafficking protein homolog C (S. cerevisiae)
IDBP-373451
SEC22 vesicle trafficking protein homolog C (S. cerevisiae)
IDBP-373457
SEC22 vesicle trafficking protein homolog C (S. cerevisiae)
IDBP-373460
SEC22 vesicle trafficking protein homolog C (S. cerevisiae)
IDBP-373462
SEC22 vesicle trafficking protein homolog C (S. cerevisiae)
IDBP-373466
SEC22 vesicle trafficking protein homolog C (S. cerevisiae)
IDBP-373469
SEC22 vesicle trafficking protein homolog C (S. cerevisiae)
IDBP-373471
SEC22 vesicle trafficking protein homolog C (S. cerevisiae)
IDBP-373473
SEC22 vesicle trafficking protein homolog C (S. cerevisiae)
IDBP-373480
SEC22 vesicle trafficking protein homolog C (S. cerevisiae)
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene encodes a member of the SEC22 family of vesicle trafficking proteins. The encoded protein is localized to the endoplasmic reticulum and may play a role in the early stages of ER-Golgi protein trafficking. Alternatively spliced transcript variants encoding multiple isoforms have been observed for this gene. [provided by RefSeq, Jan 2011]
Gene Information
Type Protein coding
Genomic Location Chromosome 3:42547969-42601080
Strand Reverse strand
Band p22.1
Transcripts
ENST00000273156 ENSP00000273156
ENST00000383750 ENSP00000373256
ENST00000264454 ENSP00000264454
ENST00000451653 ENSP00000415969
ENST00000423701 ENSP00000414576
ENST00000417572 ENSP00000407564
ENST00000449617 ENSP00000389589
ENST00000456515 ENSP00000391170
ENST00000450981 ENSP00000397170
ENST00000445388 ENSP00000404987
ENST00000454141 ENSP00000411725
ENST00000416880 ENSP00000391957
ENST00000420163 ENSP00000408242
ENST00000456222
ENST00000493107
ENST00000487701
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 1 experimentally validated interaction(s) in this database.
Experimentally validated
Total 1 [view]
Protein-Protein 1 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Gene Ontology

Molecular Function
Accession GO Term
Biological Process
GO:0006810 transport
GO:0006888 ER to Golgi vesicle-mediated transport
GO:0015031 protein transport
Cellular Component
GO:0005783 endoplasmic reticulum
GO:0005789 endoplasmic reticulum membrane
GO:0016020 membrane
GO:0016021 integral component of membrane
Orthologs
Species
Mus musculus
Bos taurus
Gene ID
Gene Order
ENSMUSG00000061536
View Gene Order
ENSBTAG00000006570
Not yet available
Cross-References
SwissProt
TrEMBL F8VQT7 F8WBN1
UniProt Splice Variant
Entrez Gene 9117
UniGene Hs.445892 Hs.595096 Hs.596636 Hs.736892
RefSeq NM_001201572 NM_001201584 NM_004206 NM_032970 XM_005265532 XM_005265533 XM_005265534 XM_005265535 XM_006713382
HUGO HGNC:16828
OMIM 604028
CCDS CCDS2699 CCDS2700 CCDS56246
HPRD 04938
IMGT
EMBL AC092047
GenPept
RNA Seq Atlas 9117

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca