Version 5.4
Homo sapiens Gene: SLC10A6
Summary
InnateDB Gene IDBG-28695.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol SLC10A6
Gene Name solute carrier family 10 (sodium/bile acid cotransporter family), member 6
Synonyms
Species Homo sapiens
Ensembl Gene ENSG00000145283
Encoded Proteins
IDBP-28697
solute carrier family 10 (sodium/bile acid cotransporter family), member 6
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary Currently no Entrez Summary Available. You might want to check the Summary Sections of the Orthologs.
Gene Information
Type Protein coding
Genomic Location Chromosome 4:86823468-86849263
Strand Reverse strand
Band q21.3
Transcripts
ENST00000273905 ENSP00000273905
ENST00000505535
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 0 experimentally validated interaction(s) in this database.
Gene Ontology

Molecular Function
Accession GO Term
GO:0008508 bile acid:sodium symporter activity
GO:0043250 sodium-dependent organic anion transmembrane transporter activity
Biological Process
GO:0006814 sodium ion transport
GO:0015711 organic anion transport
GO:0015721 bile acid and bile salt transport
GO:0043251 sodium-dependent organic anion transport
GO:0055085 transmembrane transport
Cellular Component
GO:0005886 plasma membrane
GO:0016020 membrane
GO:0016021 integral component of membrane
Orthologs
Species
Mus musculus
Bos taurus
Gene ID
Gene Order
ENSMUSG00000029321
View Gene Order
ENSBTAG00000016794
Not yet available
Pathways
NETPATH
REACTOME
REACT_19305
Transport of glucose and other sugars, bile salts and organic acids, metal ions and amine compounds pathway
REACT_11042
Recycling of bile acids and salts pathway
REACT_15518
Transmembrane transport of small molecules pathway
REACT_22258
Metabolism of lipids and lipoproteins pathway
REACT_11040
Bile acid and bile salt metabolism pathway
REACT_267716
Orphan transporters pathway
REACT_111217
Metabolism pathway
REACT_19118
SLC-mediated transmembrane transport pathway
KEGG
INOH
PID NCI
Cross-References
SwissProt Q3KNW5
TrEMBL
UniProt Splice Variant
Entrez Gene 345274
UniGene Hs.452996
RefSeq NM_197965
HUGO HGNC:30603
OMIM 613366
CCDS CCDS3614
HPRD
IMGT
EMBL AJ583502 BC107051 BC107052 CH471057 EF437223
GenPept AAI07052 AAI07053 ABO38126 CAE47477 EAX05969
RNA Seq Atlas 345274

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca