Version 5.4
Homo sapiens Gene: SETD4
Summary
InnateDB Gene IDBG-2885.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol SETD4
Gene Name SET domain containing 4
Synonyms
Species Homo sapiens
Ensembl Gene ENSG00000185917
Encoded Proteins
IDBP-2887
SET domain containing 4
IDBP-231154
SET domain containing 4
IDBP-231156
SET domain containing 4
IDBP-231158
SET domain containing 4
IDBP-231160
SET domain containing 4
IDBP-231162
SET domain containing 4
IDBP-231164
SET domain containing 4
IDBP-364765
SET domain containing 4
IDBP-364766
SET domain containing 4
IDBP-364768
SET domain containing 4
IDBP-364771
SET domain containing 4
IDBP-364773
SET domain containing 4
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary Currently no Entrez Summary Available. You might want to check the Summary Sections of the Orthologs.
Gene Information
Type Protein coding
Genomic Location Chromosome 21:36034541-36079389
Strand Reverse strand
Band q22.12
Transcripts
ENST00000332131 ENSP00000329189
ENST00000399215 ENSP00000382163
ENST00000399212 ENSP00000382161
ENST00000399208 ENSP00000382159
ENST00000399207 ENSP00000382158
ENST00000399205 ENSP00000382156
ENST00000399201 ENSP00000382152
ENST00000424303 ENSP00000399998
ENST00000429161 ENSP00000396837
ENST00000446166 ENSP00000413318
ENST00000442559 ENSP00000394822
ENST00000443703 ENSP00000392463
ENST00000481477
ENST00000487297
ENST00000469482
ENST00000485865
ENST00000460704
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 2 experimentally validated interaction(s) in this database.
They are also associated with 1 interaction(s) predicted by orthology.
Experimentally validated
Total 2 [view]
Protein-Protein 1 [view]
Protein-DNA 1 [view]
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 1 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0005515 protein binding
GO:0008168 methyltransferase activity
Biological Process
GO:0032259 methylation
Cellular Component
Orthologs
Species
Mus musculus
Bos taurus
Gene ID
Gene Order
ENSMUSG00000022948
View Gene Order
ENSBTAG00000018682
Not yet available
Cross-References
SwissProt Q9NVD3
TrEMBL A8MTS1 C9J256 C9JIU9 C9JPA1 C9JWV5 C9JYV0
UniProt Splice Variant
Entrez Gene 54093
UniGene Hs.606200
RefSeq NM_001007259 NM_001007261 NM_001286752 NM_017438 XM_005260999 XM_005261000 XM_005261003 XM_006724021 XM_006724023
HUGO HGNC:1258
OMIM
CCDS CCDS13640 CCDS42923 CCDS74791 CCDS74792
HPRD
IMGT
EMBL AF391112 AK001660 AK300009 AP000688 BC002898 BC036556 CH471079
GenPept AAH02898 AAH36556 AAL34503 BAA91819 BAG61826 EAX09757 EAX09758 EAX09759 EAX09760 EAX09762
RNA Seq Atlas 54093

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca