Version 5.4
Homo sapiens Gene: OGFOD1
Summary
InnateDB Gene IDBG-31955.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol OGFOD1
Gene Name 2-oxoglutarate and iron-dependent oxygenase domain containing 1
Synonyms
Species Homo sapiens
Ensembl Gene ENSG00000087263
Encoded Proteins
IDBP-31957
2-oxoglutarate and iron-dependent oxygenase domain containing 1
IDBP-747466
IDBP-747846
IDBP-747092
IDBP-751946
IDBP-753416
IDBP-746851
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary Currently no Entrez Summary Available. You might want to check the Summary Sections of the Orthologs.
Gene Information
Type Protein coding
Genomic Location Chromosome 16:56451490-56479100
Strand Forward strand
Band q13
Transcripts
ENST00000336111 ENSP00000337196
ENST00000569645
ENST00000568172
ENST00000565209
ENST00000561646 ENSP00000457553
ENST00000562150 ENSP00000456111
ENST00000568397 ENSP00000457746
ENST00000566157 ENSP00000457258
ENST00000569802 ENSP00000455149
ENST00000563733
ENST00000565682 ENSP00000456016
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 34 experimentally validated interaction(s) in this database.
They are also associated with 1 interaction(s) predicted by orthology.
Experimentally validated
Total 34 [view]
Protein-Protein 33 [view]
Protein-DNA 1 [view]
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 1 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0005506 iron ion binding
GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0016706 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors
GO:0031418 L-ascorbic acid binding
GO:0031543 peptidyl-proline dioxygenase activity
GO:0031544 peptidyl-proline 3-dioxygenase activity
Biological Process
GO:0006449 regulation of translational termination
GO:0008283 cell proliferation
GO:0018126 protein hydroxylation
GO:0019511 peptidyl-proline hydroxylation
GO:0034063 stress granule assembly
GO:0055114 oxidation-reduction process
Cellular Component
GO:0005634 nucleus
GO:0005737 cytoplasm
GO:0010494 cytoplasmic stress granule
Orthologs
Species
Mus musculus
Bos taurus
Gene ID
Gene Order
ENSMUSG00000033009
View Gene Order
ENSBTAG00000001171
Not yet available
Cross-References
SwissProt
TrEMBL
UniProt Splice Variant
Entrez Gene
UniGene Hs.231883 Hs.567110 Hs.672103 Hs.682310
RefSeq NM_018233
HUGO
OMIM
CCDS CCDS10761
HPRD 08553
IMGT
EMBL
GenPept
RNA Seq Atlas

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca