Version 5.4
Homo sapiens Gene: SNRPA1
Summary
InnateDB Gene IDBG-32390.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol SNRPA1
Gene Name small nuclear ribonucleoprotein polypeptide A'
Synonyms Lea1
Species Homo sapiens
Ensembl Gene ENSG00000131876
Encoded Proteins
IDBP-32392
small nuclear ribonucleoprotein polypeptide A'
IDBP-593369
small nuclear ribonucleoprotein polypeptide A'
IDBP-592340
small nuclear ribonucleoprotein polypeptide A'
IDBP-584047
small nuclear ribonucleoprotein polypeptide A'
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary Currently no Entrez Summary Available. You might want to check the Summary Sections of the Orthologs.
Gene Information
Type Protein coding
Genomic Location Chromosome 15:101281510-101295282
Strand Reverse strand
Band q26.3
Transcripts
ENST00000254193 ENSP00000254193
ENST00000394082
ENST00000560307
ENST00000559309 ENSP00000452836
ENST00000558036
ENST00000560433
ENST00000540017
ENST00000560496 ENSP00000453309
ENST00000559686 ENSP00000453521
ENST00000560383
ENST00000558059
ENST00000560987
ENST00000560856
ENST00000558020
ENST00000561187
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 107 experimentally validated interaction(s) in this database.
Experimentally validated
Total 107 [view]
Protein-Protein 107 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Gene Ontology

Molecular Function
Accession GO Term
GO:0005515 protein binding
GO:0044822 poly(A) RNA binding
Biological Process
GO:0000398 mRNA splicing, via spliceosome
GO:0008380 RNA splicing
GO:0010467 gene expression
Cellular Component
GO:0005634 nucleus
GO:0005654 nucleoplasm
GO:0005681 spliceosomal complex
GO:0005686 U2 snRNP
GO:0019013 viral nucleocapsid
GO:0030529 ribonucleoprotein complex
GO:0030532 small nuclear ribonucleoprotein complex
GO:0071013 catalytic step 2 spliceosome
Orthologs
Species
Mus musculus
Bos taurus
Gene ID
Gene Order
ENSMUSG00000030512
View Gene Order
ENSBTAG00000013593
Not yet available
Pathways
NETPATH
REACTOME
REACT_467
mRNA Splicing - Major Pathway pathway
REACT_125
Processing of Capped Intron-Containing Pre-mRNA pathway
REACT_1735
mRNA Splicing pathway
REACT_71
Gene Expression pathway
KEGG
hsa03040
Spliceosome pathway
INOH
PID NCI
Cross-References
SwissProt
TrEMBL
UniProt Splice Variant
Entrez Gene
UniGene Hs.528763 Hs.614379 Hs.621162
RefSeq NM_003090
HUGO
OMIM
CCDS CCDS10391
HPRD 04629
IMGT
EMBL
GenPept
RNA Seq Atlas

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca