Version 5.4
Homo sapiens Gene: TIGD5
Summary
InnateDB Gene IDBG-38774.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol TIGD5
Gene Name tigger transposable element derived 5
Synonyms
Species Homo sapiens
Ensembl Gene ENSG00000179886
Encoded Proteins
IDBP-484164
tigger transposable element derived 5
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary The protein encoded by this gene belongs to the tigger subfamily of the pogo superfamily of DNA-mediated transposons in humans. These proteins are related to DNA transposons found in fungi and nematodes, and more distantly to the Tc1 and mariner transposases. They are also very similar to the major mammalian centromere protein B. The exact function of this gene is not known. [provided by RefSeq, Jul 2008]
Gene Information
Type Protein coding
Genomic Location Chromosome 8:143597835-143603224
Strand Forward strand
Band q24.3
Transcripts
ENST00000504548 ENSP00000421489
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 2 experimentally validated interaction(s) in this database.
Experimentally validated
Total 2 [view]
Protein-Protein 2 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Gene Ontology

Molecular Function
Accession GO Term
GO:0003674 molecular_function
GO:0003676 nucleic acid binding
GO:0003677 DNA binding
Biological Process
GO:0008150 biological_process
Cellular Component
GO:0005575 cellular_component
GO:0005634 nucleus
Orthologs
No orthologs found for this gene
Cross-References
SwissProt Q53EQ6
TrEMBL
UniProt Splice Variant
Entrez Gene 84948
UniGene Hs.71574
RefSeq NM_032862
HUGO HGNC:18336
OMIM
CCDS CCDS6406
HPRD 18189
IMGT
EMBL AC067930 AK027832 AK223583 BC032632 BC069229
GenPept AAH32632 AAH69229 BAB55398 BAD97303
RNA Seq Atlas 84948

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca